Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03425 ATGAGCACACATGGTTCTTACAGCATGAGATCCAAAGCCTCCTTTGAAAATGAAGCGAAGGCCACAGTGAAAGAAAGTGGGGGAGGAGGGGGTGGAGGGAAGAGTGGGAAGACAATGTCCACCAACAGCAAGGAGAATCTGTTCATATGTTTTCTGGTGACACTTTGGTACTCTTCAAATATTGGTGTGATCCTTCTGAACAAGTACTTGCTTTCAAACTATGGGTTCAAGTTCCCCATCTTCCTCACAATGTGCCACATGTCAGCCTGTGCTGTTCTCAGCTATGTCTCCATTGTGTTCTTCAAGGTGGTGCCTCAGCAGATGATCAAATCAAGGTCTCAGTTCATGAAGATTGCAACTTTGAGCCTTGTCTTCTGTGCCTCTGTGGTGGGTGGCAACATCTCCCTCAGGTACCTCGCCGTGTCCTTCAACCAGGCGGTTGGGGCAACCACACCCTTTTTCACCGCTGTCTTTGCCTATTTGGCCACCCTTAAGAGAGAGGCTTGGGTTACCTATGCTGCCCTTGTTCCTGTTGTTGCTGGGGTTGTCATTGCTAGTGGGGGTGAACCAGGGTTTCACTTATTTGGATTCGTTATGTGCCTAAGTGCAACCGCTGCAAGAGCTTTCAAGTCTGTCCTTCAGGGCCTTTTACTTTCTTCAGAAGGGGAAAAGTTGAACTCCATGAATTTGCTCCTGTACATGTCTCCAATCGCAGTCCTAGTTTTGTTACCTGCAGCTCTTATCATGGAACCTAATGTGGTAGATGTCACACTGACGCTTGCAAAGGACCACAAGTCTATGTGGCTTCTTCTTTTGCTTAACTCTATCACAGCATATGCAGCAAACTTAACAAACTTCTTGGTGACTAAACATACCAGTGCTCTCACACTCCAGGTGTTAGGCAATGCAAAAGGCGCAGTGGCTGTTGTAATCTCAATACTGCTATTCAGAAACCCTGTGACTGTAGTTGGCATGGGGGGGTATACAATTACTGTGATGGGAGTAGCTGCATATGGGGAAACAAAAAGGAGGTTTAGATGA 1041 0.4678 MSTHGSYSMRSKASFENEAKATVKESGGGGGGGKSGKTMSTNSKENLFICFLVTLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYVSIVFFKVVPQQMIKSRSQFMKIATLSLVFCASVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWVTYAALVPVVAGVVIASGGEPGFHLFGFVMCLSATAARAFKSVLQGLLLSSEGEKLNSMNLLLYMSPIAVLVLLPAALIMEPNVVDVTLTLAKDHKSMWLLLLLNSITAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVVGMGGYTITVMGVAAYGETKRRFR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03425 346 PANTHER SOLUTE CARRIER FAMILY 35 51 341 - -
Spst1g03425 346 Pfam Triose-phosphate Transporter family 49 338 IPR004853 -
Spst1g03425 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03425 Spst-Chr1 42891772 42895097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03425 40 346 Organic Solute Cotransporters AT5G04160 81.759 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03425 - - gmx:100797956 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03425 1 42891772 42895097 Spst1g03425 1 42891772 42895097 ECH