Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03420 ATGGAAGACAAGACATGGGGATGTTCATCAAGTGAAGATAGTGATGATGAGGTCTATTTGCAGAATGCAAGTGATGAAGAGGAGCTTGGCTTTTCATCTGGTTCCATGCCCAAGTTGCAGTTCAGGAGCGTGAAATCCAAAAGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAAAATGGCAAATTGTGGATAACAACTGGAATAGTTCGTAGTGGCAAGATTTATTCTTCAATCGAGGAGACTGTGTATCTTACGGAACTTGGAGCTTTAGACCTATTAGAAAATAGTGGTAGAAGGATATCTCTGACAGAAATGTATGAAAAGGTTGCTGGCGGGAAGAGTGGATGTTGTTGGGAGTTGTTTGAGGTTTACAGGCACCTCAAGTCTCTCGGTTACATAATTGTGCGGCATGGTGTTCTTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAGACCTGCTGCTCTTGAAATCACAGAAAAAAGCAATGGACTAGCAGATATGGGTTCCAAATCTGAGCTTGCCATGGATAAGTTATTTTCTGATTTGCAGATTAATGAGTTGATGCCAGATTTTGATGTTTATCTTCCAAATAGCCGGTTTAGAAAGTCTTCCCCTGGTGATCCAAGTTTTCTACTATACTTATCTAGGGGTCATCCACCATGTAAAGTAGAGATTGAAGCTCTTGAGAAACAATGTGGTGGCATTCCTTTGAAAATCTGCCAGGTCACAGAGGGAAGGGTCAGTTTCTTTTCCTATGACAAGGTGGAACTTCCTGTTCTACCCTGA 798 0.4135 MEDKTWGCSSSEDSDDEVYLQNASDEEELGFSSGSMPKLQFRSVKSKSCWNEEMGMGEVIEKNGKLWITTGIVRSGKIYSSIEETVYLTELGALDLLENSGRRISLTEMYEKVAGGKSGCCWELFEVYRHLKSLGYIIVRHGVLWSLKSIKSSHRPAALEITEKSNGLADMGSKSELAMDKLFSDLQINELMPDFDVYLPNSRFRKSSPGDPSFLLYLSRGHPPCKVEIEALEKQCGGIPLKICQVTEGRVSFFSYDKVELPVLP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03420 265 Pfam tRNA-splicing endonuclease subunit sen54 N-term 37 97 IPR024336 -
Spst1g03420 265 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 8 170 IPR024337 -
Spst1g03420 265 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03420 Spst-Chr1 42859096 42860986 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03420 K15326 - qsa:O6P43_010121 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03420 1 42859096 42860986 Spst1g03420 1 42859096 42860986 ECH