Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03410 ATGTCAGGGTTAAAGGAATTGCTGAAGAAAGGGTTAGGAGACATGGCCTTCAACGCCGGCGGAGGAGCCATCACCTGGTTCCCCGGCCACATGGCCGCCGCCACACGCGCTATCCGCCACCGCCTCAAACTCTCGGACCTCGTCATCGAAGTCCGAGATGCTCGCATTCCCCTCTCCTCCGCCAACGCAGATCTCCAGCCACACCTCTCCGCAAAACGACGCGTTGTCGCACTGAATAAGAAAGACCTTGCCAATCCTAACATCATGCATAAGTGGAGGCATTATTTCGAAACGTGCAAGCAAGATTGCATTCCGATAAACGCGCACAGCAAGAGTTCCGTGACGAAGCTTTTGGAACTGGTGGAGTTCAAGTTGAAGGAAGTCATATGCAGGGAACCGACTCTGCTTGTGATGGTGGTCGGTGTTCCCAACGTTGGCAAGTCTGCTTTGATTAACTCCATTCATCAGATTGCACAGTCTCGCTTTCCTGTGCAGGAGAAGATGAAGCGTGCTGCTGTTGGTCCGCTACCTGGTGTTACTCAAGACATTGCAGGATTTAAGGTCCGGTTAACAAACATTAATATGAACATAAACAGAACTGCAATTCTTTTGATTCTATTGTTGTTCGTGGGAAGCAAAGCACAGTTTTATGCCAGAAACAATTCTGCCTCCATTCTGTTTCATATAGCACATAAACCAAGCATATACGTCCTAGATTCCCCAGGGGTTCTGGTTCCAAGCATCTCGGACATAGAGACAGGGTTAAAACTGGCCCTGGCAGGGTCTGTCAAAGATTCAGTAGTGGGTGAAGAGCGTATTGCTCAATATTTATTGGCAGTGTTGGACACCCGGGGGACTCCACTTCACTGGAAGCACCTAAATAACAGGAGAATTGATGGGATTGAATACGAACCTGAGGAGAATCATGAATATAGTCTGAAAAATCTTAAGCCAAAGAGAAGAAATCTGCCAAATAGATCTGATTTGGTCTATGTTGAGGATCTTCTAATGGGAGTTCAACATGCACTCTATTCAACTCTAACAGAATTCGATGGGAATGTAGAAGATGAAAGTGACTTGGAGAGCCTTATTGACCTGCAATTTAGTGCACTTCAAAAGGCAATGAAGATACCTCACAAAGCTTCAGAAGCACGGTTAATGGTATCCAAGAAGTTACTTACTCTATTCAGAACTGGTAAGCTTGGTCCTTTCATTCTTGATGATGTCCCGGATGTCAAGCCTGTATCCTAA 1251 0.4628 MSGLKELLKKGLGDMAFNAGGGAITWFPGHMAAATRAIRHRLKLSDLVIEVRDARIPLSSANADLQPHLSAKRRVVALNKKDLANPNIMHKWRHYFETCKQDCIPINAHSKSSVTKLLELVEFKLKEVICREPTLLVMVVGVPNVGKSALINSIHQIAQSRFPVQEKMKRAAVGPLPGVTQDIAGFKVRLTNINMNINRTAILLILLLFVGSKAQFYARNNSASILFHIAHKPSIYVLDSPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLDTRGTPLHWKHLNNRRIDGIEYEPEENHEYSLKNLKPKRRNLPNRSDLVYVEDLLMGVQHALYSTLTEFDGNVEDESDLESLIDLQFSALQKAMKIPHKASEARLMVSKKLLTLFRTGKLGPFILDDVPDVKPVS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03410 416 CDD YlqF 26 244 - -
Spst1g03410 416 Gene3D - 24 206 IPR027417 -
Spst1g03410 416 Pfam 50S ribosome-binding GTPase 137 291 IPR006073 GO:0005525
Spst1g03410 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 259 IPR027417 -
Spst1g03410 416 FunFam Mitochondrial GTPase 1 24 197 - -
Spst1g03410 416 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 16 412 - -
Spst1g03410 416 Gene3D - 249 323 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03410 Spst-Chr1 42773801 42778597 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03410 K19828 - gmx:100801130 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03410 1 42773801 42778597 Spst1g03410 1 42773801 42778597 ECH