Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03396 ATGGCTTCTTTAGTATCTTCATCATTTACTCTACCAAGCTCTAAACCTGACCAGCTTCATTCTCTTGCCCAGAAGCATCTTTTTCTTCATTCTTTCCTTCCCAAGAAGGGTGGTTATAATGGTAGTTCAAAAGCCTCTCTGAGAGTGAAGTGTGCTGCCATTGGCAATGGTCTATTCACCCAAACCACCCCAGAAGTTCGTAGAATAGTTCCAGAGAATGACCAAAACTTGCCAACAGTTAAAATTGTGTATGTGGTTCTTGAGGCTCAGTACCAATCATCTGTCACTGCTGCAGTCCTGGCTCTCAACAGTAAAAGGAAACATGCTTCCTTTGAGGTTGTGGGTTACTTGGTTGAGGAGCTTCGAGACGCGTCAACGTATCAGACTTTCTGCAAGGACTTAGAGGATGCTAACATCTTCATTGGGTCTTTGATTTTTGTGGAGGAGCTTGCTCTCAAGATCAAGGCCGCAGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTTCCATCAATGCCTGAAGTTATGAGGCTTAACAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGGCAATCCAAGAGTCCCTTTTTCCAGCTTTTCAAGAGAAAGAAGCCTCAGTCTGCTGGCTTTGCTGACAGCATGTTGAAGCTGGTGAGGACATTGCCAAAGGTTTTGAAGTATTTGCCAAGTGATAAAGCTCAGGATGCCAGGCTCTATATACTGAGTCTGCAATTTTGGCTCGGGGGATCTCCTGATAACTTGCAGAATTTCCTGAAAATGATTACTGGATCTTATATTCCAGCACTGAAAGGTGCGAAGATCGAGTATTCGGAGCCGGTTCTGTACTTGGACAATGGGATTTGGCACCCTTTGGCTCCTTGTATGTATGATGATGTGAAAGAGTATTTGAATTGGTATGGTACTAGAAGGGATGCAAATGAGAAGCTGAAGAGTCCGAATGCACCTGTCATTGGTTTGGTTTTGCAAAGGAGTCATATTGTGACTGGGGACGATGGACACTATGTGGCTGTGATCATGGAGCTGGAGGCTAGAGGGGCTAAGGTCATTCCCATTTTTGCTGGTGGACTTGACTTTTCAGGGCCAGTGGAGAAGTTCTTCATTAATCCAATTACGAAGAAACCATTTGTGAATTCTGTGGTATCCCTCACTGGCTTTGCTCTTGTTGGAGGGCCAGCAAGGCAGGACCACCCAAGGGCGGTTGAGGCTTTGATGAAACTTGATGTTCCTTACATTGTTGCCCTGCCACTGGTGTTTCAGACAACTGAAGAATGGCTCAATAGTACTCTTGGTCTGCATCCAATACAGGTTGCTCTTCAAGTTGCTCTGCCAGAGCTAGATGGAGGCATGGAGCCAATTGTTTTCGCTGGTCGAGATCCTAAAACAGGAAAATCTCATGCTCTACATAAGAGAGTGGAACAGCTCTGCATCAGGGCAATCAGATGGGCTGAACTGAAAAGAAAATCAAAGGAAGAGAAGAAACTAGCAATCACCGTCTTCAGCTTCCCTCCAGACAAAGGAAATGTGGGAACTGCTGCCTATCTCAATGTATTTGCCTCTATATACTCAGTCATGAAAGAACTAAAAAGAGATGGTTACAATGTTGACGGGCTTCCAGAGACTCCAGAAGCTTTGATTGAAGAGGTTATTCATGACAAAGAAGCTCAATTCAGCAGTCCAAATTTGAACATTGCTTACAAAATGAGTGCCCGTGAGTACCAAAATTTGACTCCCTATTCCACAGCACTGGAAGAGAATTGGGGAAAACCCCCTGGCAATCTGAATGCAGATGGAGAAAATCTGTTGGTATATGGGAAACAATATGGTAATGTCTTCATAGGTGTTCAGCCCACATTTGGCTATGAAGGGGATCCAATGAGGCTGCTTTTCTCCAAATCTGCTAGCCCTCATCATGGATTTGCAGCATATTATTCCTTTGTTGAGAAAATCTTCAAAGCTGATGCTGTACTTCATTTTGGGACACATGGTTCCCTTGAATTCATGCCTGGAAAACAGGTGGGGATGAGTGATGTATGCTACCCTGACAGTCTGATTGGTAATATTCCAAATGTGTATTACTATGCTGCAAACAACCCTTCTGAGGCCACCATAGCCAAGCGCAGAAGTTATGCAAACACCATTAGCTATCTGACTCCTCCAGCGGAAAATGCTGGACTATACAAAGGTCTTAAGCAGTTAAGTGAGCTCATCTCCTCATATCAGTCCCTCAAAGACACTGGCCGTGGAGCACAAATTGTGAGTTCCATTATCAGCACAGCTAAACAGTGTAATCTTGACAAAGATGTGACACTGCCAGATGAGGGTGAGGAGATCACACCTAAAGAGCGCGACCTTGTGGTTGGAAAGGTGTATTCCAAGATCATGGAGATTGAGTCTCGTTTGTTACCTTGTGGGCTTCATGTCATTGGTGAGCCTCCTTCAGCCTTGGAAGCTGTTGCTACACTGGTCAACATTGCTGCACTTGATCGTCCTGAAGATGATATTTCTTCTCTTCCATCAATATTAGCTGACACTGTAGGAAGAGATATAGAAGATGTGTATAGAGGAAGTAACAAAGGAATATTGAAGGATGTAGAGCTTCTTAGGCAAATAACTGAGGCATCACGTGGGGCAATCACTGCCTTTGTGGAGCGCACTACCAATAGTAAGGGTCAAGTTGTTGAAGTAGCTGATAAGCTTACCTCAATCCTTGGATTTGGCATAAATGAGCCATGGATTCAGTATTTGTCAAACACCAAATTTTACCGAGCTGATAGGGAAAAACTTAGAACCTTGTTTATGTTCCTGGGAGAATGCTTGAAGTTGGTTGTGGCCGATAATGAAGTGGGAAGTTTAAAGCAAGCCTTGGAAGGTAAATATGTGGAGCCAGGGCCTGGTGGTGACCCAATAAGAAATCCTAAAGTTCTGCCAACAGGAAAGAATATTCATGCGCTGGACCCCCAAGCTATTCCTACAACGGCTGCAATGCAGAGTGCCAAAATAGTGGTAGATAGGTTGATCGAGAGGCAGAAAGCTGAGAATGATGGAAAATATCCCGAGACAATTGCACTTGTATTGTGGGGAACTGATAATATTAAAACATATGGTGAATCCCTGGCTCAGGTCTTGTGGATGATTGGTGTGACACCAGTGGCTGATACCTTTGGTAGGGTAAACCGGGTGGAGCCTGTTAGTCTTGAAGAGCTTGGAAGGCCTAGAATTGATGTTGTTGTTAATTGCTCCGGAGTGTTTAGAGACCTTTTCATCAATCAGATGAACCTTCTAGACAGTGCAGTGAAGATGGTTGCTGAATTAGATGAACCAGCAGAGCAAAACTTTGTAAGAAAGCATGCGTTAGAACAAGCTCAAGCCCTTGGAGTTGAAGTTCGAGAGGCAGCAACGAGGATATTCTCTAACGCCTCCGGCTCCTACTCCTCAAACATAAACCTGGCTGTGGAGAATTCCTCATGGAATGATGAAAAGCAGCTCCAGGACATGTATCTTAGCAGAAAGTCTTTTGCTTTTGATTGTGATGCCCCTGGTGCTGGCATGACTGAGAAAAGAAAAGTCTTTGAGATGGCTCTTAGCACAGCAGATGCCACATTCCAAAACCTTGATTCATCAGAAATTTCCCTCACTGATGTTAGTCATTACTTTGACTCAGACCCAACTAATCTGGTTCAAAATCTAAGGAAAGATGGGAAGAAGCCTAGTGCATACATTGCTGATACAACTACAGCCAACGCTCAGGTTCGTACACTTTCTGAGACAGTTAGACTTGACGCAAGAACCAAACTGTTGAATCCAAAGTGGTATGAAGGCATGTTGTCTACTGGATATGAGGGTGTTCGTGAGATTGAGAAGAGACTAACCAATACAGTGGGATGGAGTGCAACTTCAGGCCAAGTTGACAATTGGGTGTATGAAGAAGCCAACACAACTTTCATTCAAGATGAGCAAATGCTGAAAAAGCTCATGAACACTAATCCAAACTCCTTCAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGACGTGGTTACTGGGAAACTTCAGAAGATAATATTGAGAAGCTGAGGCAGTTATATTCGGAGGTGGAAGACAAAATTGAAGGCATTGATCGCTGA 4152 0.441 MASLVSSSFTLPSSKPDQLHSLAQKHLFLHSFLPKKGGYNGSSKASLRVKCAAIGNGLFTQTTPEVRRIVPENDQNLPTVKIVYVVLEAQYQSSVTAAVLALNSKRKHASFEVVGYLVEELRDASTYQTFCKDLEDANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKPQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMITGSYIPALKGAKIEYSEPVLYLDNGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKFFINPITKKPFVNSVVSLTGFALVGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCIRAIRWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFASIYSVMKELKRDGYNVDGLPETPEALIEEVIHDKEAQFSSPNLNIAYKMSAREYQNLTPYSTALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTAKQCNLDKDVTLPDEGEEITPKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDDISSLPSILADTVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNSKGQVVEVADKLTSILGFGINEPWIQYLSNTKFYRADREKLRTLFMFLGECLKLVVADNEVGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLIERQKAENDGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVTPVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDSAVKMVAELDEPAEQNFVRKHALEQAQALGVEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSTGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEQMLKKLMNTNPNSFRKLVQTFLEANGRGYWETSEDNIEKLRQLYSEVEDKIEGIDR 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03396 1383 CDD CobN_like 156 1254 IPR003672 GO:0009058
Spst1g03396 1383 NCBIfam magnesium chelatase subunit H 81 1381 IPR011771 GO:0015995|GO:0016851
Spst1g03396 1383 Coils Coil 1357 1383 - -
Spst1g03396 1383 Pfam CobN/Magnesium Chelatase 246 1363 IPR003672 GO:0009058
Spst1g03396 1383 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 30 1382 IPR003672 GO:0009058
Spst1g03396 1383 Pfam Domain of unknown function (DUF3479) 81 242 IPR022571 GO:0016851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03396 Spst-Chr1 42584815 42590904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03396 K03403 - gmx:100787735 2660.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03396 1 42584815 42590904 Spst1g03396 1 42584815 42590904 ECH
Spst1g03396 1 42584815 42590904 Spst7g00328 7 2566199 2572028 PCT