Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03381 ATGGGTAAGGTCTCTGGTGTTGTTTCCCGTCAAGTTTTGCCTGCTTGTGGCAATCTTTGTTTCTTCTGTCCTGCTCTAAGGGCAAGGTCAAGACAACCTGTTAAGAGGTATAAGAAGCTCATTGCTGATATTTTCCCTCGTAATCAGGAGCAAGGGCCAAATGATAGACAAATCGGAAAATTATGTGATTATGCTGCCAAAAATCCTTTACGCATCCCAAAGATTATGCAAGCCCTTGAGCAAAGGTCATTGTTTGCAAATAGCTTGCTAAGTATTATTCACACGCTACTAGATCAATCAGGAGAAGATGAAATGAGAATTCTAGGATGCCAAGTTTTATTTGATTTTGTAAATAATCAGGTTGATGGAACTTACTTGTTCAACTTAGAAGCTGCCATCCCAACGCTTTGTCAATTAGCTCAAGAAACAGGAGAAGATGAAAGGACAAGAATGAGTCGTTCAACTGGTTTGAAAGCCCTTTCAGCAATGTTGCTTCAACTTTACCTTAGCTCTAAGGTAATGCCTAATGCAAATCTAGTTCGATTTATGGGTGAAAATTCTCATATATCAGTTGAATTTGATAATATTGTGTCTGTTGTGTTGGAAAATTATGAAGTTCCTAAAGAAAATTTAGCGCATCTTGATCATGAGGAACATGGCGTTGAGAATACATTGTTCCAAGATGGTATGGCCAATGAGGATCAAAACTCTCCTTTGCTTGATGTCAAAAGGAGAAACCATTCGTGGAGAAAAGTTGTTAACGATAAAGGCGAAACGATTCATATGGATCATAAAACTGTCCTTAAAGAACCTCATATGCAACTTGACATTGTTGAGGTTACCACTTCACTTGCCCAATATGCAAAGGTTCAACCTTCTGTGTCAATAGTTGGTGCAGTAAGTGACATGATGAGACATTTGCGGAAGTGCATACATTGTTCCCTAGACGAGTCAAATATGGCCCCTGATGTAATAAGTTGGAATAAAAATTTCAGAAAAGTTGTTGATAAGTGCCTTGTAAAGTTGTCAAATAAGGTTGGAGAACCAGACCCCATTCTTGATGTTATGGCAGTGATGTTAGAGAACATCACAACTACCACCACAACATGTAGAACCACAATTTATGCTGTAAATCGAACTGCCCAAATTGTAACTTCTTTACCAAATGCTTTATATCATAATAAGGTATTCCCAGATACCTTGTTTCATCAACTGCTCATGGCTATGGTCCATCCAGATCATGAAACACGAGCGGTAGCTCATCGTATATTTTCTGTCATTCTTGTGCCAAGCACAATCTTGCCTCGTCCAAACATGTCTCTTTCTCATCGTAATCCATCAAGTGTTCCACGAACTCTATCTCGAACAGTATCTGTTTTCTCTTCTTCAGCTGTCTTATTTGAAAAGTTAAAACTGAACAAACGTTCTTCAAGTGAAAAATTTATCGAGTATAACAAAGAAAATGTTTTTGGAGAGATTGAACCAATTAATAATAATGTTGGGATTGTAAGAAAGATCAAGTCAATGCATAATCGGGTGTCTAGTGTGAATAACCCTCCCCTACAAATTGAAGTGGATGAAGTTGCCACAAAAAAAGATAGAAACTCGGAGACTACTGCTCTTAGACTAAGTAGGCTTCAGATAAATCGATTACTATCAGCAATTTGGGTACAATCTATGTCTCCTGGAAATATGCCTACAAATTATGAAGCTATTGCTAATTCATACACTCTGGTGTTGCTTGTTTCCAGAGAAAAGGATCTTAAGAATTCTTTTCATGAGGTACTTGTTCGAAGTTTTCAGCTTGCTTTTTCTTTATGGAATATTTCTCTTAAAGAAGCTACTTCAATGATTGTATTTTCTTCAAAAGAATACAACATTGATCGTCTTGTCCAGAGCGCCAAGGGAGTGCTTATGGATAGACAGGTTGATCCCTACCTTCAATTAATTGAAGATTATAAGTTGCAAGTTGTCAGCTTTGCACCTGACAATTTAACCATCATCTATGGATCTAAAGAGGATGATGATAGGGCCAAAAAGACACTTTCGGAGTTAATGAGTAATATACACCAAACACGAGACATATTTGCTGTAGAAATCATCAAGAGCTTGGAAATGTTTGCAAAGGCTGAATTATCATCAATAAAAGAACAACTACTGCAAGATTTTGCACCAGATGCGATGTGTGGACTTGGATCTCAATTGAATGTGAAAATGGCTACAAAGCATGCTGCTAAAATTTCAACTATTGATGATGACTTCATTCTTGAACCTTCTGAAAGTCAAACTAAACAAAACTCGGCATTATCTACAGAGGTCCCTAATTTTCTAAGTGCTAATCAACTTTTAGAACTAGTGTTGGACACATCTAACCCAACTGAGAGGATATCTGTATCAAACACATTTAACATGCCATACAAAGATATGGCGGATCAATGTGAGGAACTTTTGATGGAAAAGCAGAAGATGTCTAGATTGATGAGTGCTCAACATAAGCAAGACTCTTCGGTGGACTCAGATTTATTGAATCGAGGCAGTGAATTGAAAAAAATGGATTCCTCTAACCATGTGGATGTGGATTTTCCTAAGGTGGATGTTCCTCCCTTTGATGATAATGTTGAAGTGGATTTTTTCAAACCCACTTCTAGTCCTCTTCCAATATTGTGTGCAACAGAATATCAAAATCAACCTCACCCTTTCGAACTTCCAGTATCAAGTCCCTATGATAACTTTTTAAAAGCTGCTGGTTGTTGA 2754 0.3755 MGKVSGVVSRQVLPACGNLCFFCPALRARSRQPVKRYKKLIADIFPRNQEQGPNDRQIGKLCDYAAKNPLRIPKIMQALEQRSLFANSLLSIIHTLLDQSGEDEMRILGCQVLFDFVNNQVDGTYLFNLEAAIPTLCQLAQETGEDERTRMSRSTGLKALSAMLLQLYLSSKVMPNANLVRFMGENSHISVEFDNIVSVVLENYEVPKENLAHLDHEEHGVENTLFQDGMANEDQNSPLLDVKRRNHSWRKVVNDKGETIHMDHKTVLKEPHMQLDIVEVTTSLAQYAKVQPSVSIVGAVSDMMRHLRKCIHCSLDESNMAPDVISWNKNFRKVVDKCLVKLSNKVGEPDPILDVMAVMLENITTTTTTCRTTIYAVNRTAQIVTSLPNALYHNKVFPDTLFHQLLMAMVHPDHETRAVAHRIFSVILVPSTILPRPNMSLSHRNPSSVPRTLSRTVSVFSSSAVLFEKLKLNKRSSSEKFIEYNKENVFGEIEPINNNVGIVRKIKSMHNRVSSVNNPPLQIEVDEVATKKDRNSETTALRLSRLQINRLLSAIWVQSMSPGNMPTNYEAIANSYTLVLLVSREKDLKNSFHEVLVRSFQLAFSLWNISLKEATSMIVFSSKEYNIDRLVQSAKGVLMDRQVDPYLQLIEDYKLQVVSFAPDNLTIIYGSKEDDDRAKKTLSELMSNIHQTRDIFAVEIIKSLEMFAKAELSSIKEQLLQDFAPDAMCGLGSQLNVKMATKHAAKISTIDDDFILEPSESQTKQNSALSTEVPNFLSANQLLELVLDTSNPTERISVSNTFNMPYKDMADQCEELLMEKQKMSRLMSAQHKQDSSVDSDLLNRGSELKKMDSSNHVDVDFPKVDVPPFDDNVEVDFFKPTSSPLPILCATEYQNQPHPFELPVSSPYDNFLKAAGC 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03381 917 PANTHER PUTATIVE, EXPRESSED-RELATED 261 917 - -
Spst1g03381 917 SUPERFAMILY ARM repeat 69 430 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03381 Spst-Chr1 42398795 42411141 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03381 K21842 - gmx:100817296 951.814