Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03374 ATGTTGAACGATCCATTAATCATTGCTTCAACGAGCCAGGGATCAGAGGCTCATGAAGAAGAAGATGAACACATAAGAGAAATCCACGCCTTAACCCCACCTCGCCCTCCCCCTCCACGTGGCAGACCCTGGGACACCCTTCACACTCACAGGTCAAGCTCTCTCTCCGTCGCCAGCACCGACGGTGGCACCTCCTCCTCCGACAACTTCACCACCATGAGCAGAGAGTTCAGCGCCTTGGTTCTCGCGGGCTCCACCATCGACCCCGACAACAACCACAGCATCACTCCCATCAATGAAAACAACGTGAACAACAACCTGGGGAGGATCAGAGAAGAGGAGTTGATGGAAGAGACGAACCCTTTGGCGATCGTGCCGGATAACCACCCTCTGGACCCGGTTCCCTCGTCGTCTGTAATGGGTGCTAGTGGTGGTGCGCGTGAAGAGCACGTGTCTGTGCAGAGGGTGAAGAAGGAGGAGGTGGATGCGAAGATATCAGCGTGGCAGAACGCGAAGGTTGCGAAGATTAACAACAGGTTCAAGAGAGAAGACGCTGTCATCAATGGGTGGGAGAGCGAGCAGGTACAGAAAGCTTCCTCGTGGATGAAGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGGGCAAGAGCAATGGAGAAAATGCAAAACGACATAGCAAAAGCTCATAGAAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCAAAAAGAGGAACCAAAGTGGCTAGGGTTTTGGAGATTGCTAGTCTCATGAGAGCAGTTGGAAGACCTCCTGCCAAAAAATCCTTCTTCTAA 810 0.5235 MLNDPLIIASTSQGSEAHEEEDEHIREIHALTPPRPPPPRGRPWDTLHTHRSSSLSVASTDGGTSSSDNFTTMSREFSALVLAGSTIDPDNNHSITPINENNVNNNLGRIREEELMEETNPLAIVPDNHPLDPVPSSSVMGASGGAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03374 269 MobiDBLite consensus disorder prediction 48 66 - -
Spst1g03374 269 Pfam Remorin, C-terminal region 160 264 IPR005516 -
Spst1g03374 269 MobiDBLite consensus disorder prediction 1 66 - -
Spst1g03374 269 Coils Coil 202 237 - -
Spst1g03374 269 PANTHER OS02G0116800 PROTEIN 37 265 - -
Spst1g03374 269 MobiDBLite consensus disorder prediction 15 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03374 Spst-Chr1 42343277 42345493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03374 - - gmx:100527684 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03374 1 42343277 42345493 Spst1g03374 1 42343277 42345493 ECH
Spst1g03374 1 42343277 42345493 Spst7g00320 7 2491372 2493400 PCT