Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03363 ATGGAGAGTGGAGCCAGTAGTAAGAAAGCATCACCTCAATCTTCCCAGCAATTCAGTTCTGTTACCACTCCTCTGCTTGATTTGGAAAAGGAAACTGGGATATCAAGCACAGGAGTGTCTCAAGAGAGGGTCGTAGAAGACGCTGAGAAAGATGAATTGGAAGTTGATGACTCTCCCATAGAGCAAGTAAGGCTAACAGTTCCAACCGCTGATGATCCTACTCAGCCAGCACTAACATTCCGGACATGGGTTCTAGGGTTGGCATCATGTGTGCTTCTTGCCTTTGTGAACCAATTTTTGGGCTACAGAACCAACCCTTTAAAAATCTCTTCAGTTTCAGCACAGATTATTACACTTCCTCTCGGGAAACTGATGGCTTCAACTCTTTCGACTAAACCAATCCGACTGCCATTCACGAAATGGTCATTTTCAATGAATCCAGGGCCATTCACTTTGAAGGAGCATGTGCTGATCACCATCTTTGCTACAGCTGGATCTAGTGGTGTTTATGCAATCAGCATCATCACAATTGTGAAGGCCTTCTATCACAGGAGCATCCATCCAGCAGCAGCTTATTTTTTAGCACTGTCAACCCAAATGCTTGGGTATGGATGGGCTGGGATTTTTAGAAGATTCCTAGTCGATTCCCCTTACATGTGGTGGCCTGAAAACCTTGTGCAGGTATCTCTATTCAGGGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGAAACACTAGGCTGCAATTCTTTTTCCTAGTCTTTGTAGCGAGCTTTGCCTATTACACTCTTCCAGGGTACTTTTTCCAAGCAATATCAAGCATCTCCTTTGTTTGTTTGATTTGGAAAGATTCCATCACAGCTCAACAAATTGGTTCAGGCATGAATGGAATTGGCATCGGCTCATTTGGCCTCGATTGGAACACTGTTGCAGGATTCTTAGGTAGTCCTTTAGCTGTACCTGGCTTTGCCATTATCAACATGTTAATAGGATTTATTCTGGATATCTATGTTCTGATTCCCCTAGCCTATTGGAGCAATTTATATGATGCCAAAAAGTTTCCCCTTATTAGTTCTCACACGTTTGACTCAACTGGTGCAACATATAATGTTACTCGGATTCTAAATCCCAGAACTTTTGACATTGATTTGGACAGTTATAACAATTACAGCAAGATCTATCTTAGTATCACCTTTGCATTTGAGTATGGATTAAGCTTTGCAACTTTGACTGCCACTATTTCCCACGTTGTCCTCTTCCATGGAGAGATGATTCTTCAGATGTGGAGGAAGACAACAAGATCAATAAAAGAACAACTTGGAGATGTCCATACAAGAATTATGAAGAGAAACTATGAACAAGTCCCTGAATGGTGGTTTGTCACCATATTGGCCATTATGGTTGTTATGGCCTTAGTTGCTTGTGAAGGCTTTGGGAAGGAACTCCAACTGCCATGGTGGGGAATTTTACTTTCTCTAATAATTGCATTAGTCTTCACCTTGCCAATTGGGGTTATTCAAGCCACAACAAACATACAAACGGGACTCAACGTGATTGCAGAGTTAATAATTGGATTCATCTACCCAGGAAAGCCCCTTGCTAACGTAGCCTTCAAGTCTTATGGACATGTCAGTATGGTACATGCACTTGGGTTTCTTGGTGACTTCAAATTAGGCCACTACATGAAAATTCCGCCAAAATCTATGTTCATTGTGCAGCTGGTAGGCACAGTTGTTGCCTCAACTGTCTACTTTGCCACAGCTTGGTGGCTTCTCACATCTGTTGAAAACATCTGTGATGAAGCATTGTTGCCAAAGGGTAGTCCATGGACATGCCCTGGTGATGATGTGTTCTATAATGCATCAATCATATGGGGAGTAGTAGGACCAAAGAGAATGTTCACCAAAGATGGTATTTACCCTGGGATGAATTGGTTTTTCCTCATTGGTCTACTTGCTCCCATTCCAGTGTGGTTGCTTTCTCATAGATTTCCCAACCACAACTGGATTCAACTCATCAACATTCCCATCATCACTGCAGGTGCTTCCAACATTCCACCAGCCAGATCAGTGAATTATATTACATGGGGTACTGTTGGAATCTTCTTCAATTTATATGTTTATAGAAAGTTCAAGGCATGGTGGGCCCGGCATACTTACATCCTTTCAGCTGCTTTAGATGCTGGAGTTGCTTTTATGGGTGTGGCCCTCTATTTTACCCTTCAATCTAATGGTATTTTTGGTCCAGCCTGGTGGGGTCTTGATGCAGACCATTGCCCTTTGGCCAAATGCCCCACAGCTCCAGGCGTACAAGCCAATGGATGCCCTCTTCTTTGA 2337 0.4275 MESGASSKKASPQSSQQFSSVTTPLLDLEKETGISSTGVSQERVVEDAEKDELEVDDSPIEQVRLTVPTADDPTQPALTFRTWVLGLASCVLLAFVNQFLGYRTNPLKISSVSAQIITLPLGKLMASTLSTKPIRLPFTKWSFSMNPGPFTLKEHVLITIFATAGSSGVYAISIITIVKAFYHRSIHPAAAYFLALSTQMLGYGWAGIFRRFLVDSPYMWWPENLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYTLPGYFFQAISSISFVCLIWKDSITAQQIGSGMNGIGIGSFGLDWNTVAGFLGSPLAVPGFAIINMLIGFILDIYVLIPLAYWSNLYDAKKFPLISSHTFDSTGATYNVTRILNPRTFDIDLDSYNNYSKIYLSITFAFEYGLSFATLTATISHVVLFHGEMILQMWRKTTRSIKEQLGDVHTRIMKRNYEQVPEWWFVTILAIMVVMALVACEGFGKELQLPWWGILLSLIIALVFTLPIGVIQATTNIQTGLNVIAELIIGFIYPGKPLANVAFKSYGHVSMVHALGFLGDFKLGHYMKIPPKSMFIVQLVGTVVASTVYFATAWWLLTSVENICDEALLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLIGLLAPIPVWLLSHRFPNHNWIQLINIPIITAGASNIPPARSVNYITWGTVGIFFNLYVYRKFKAWWARHTYILSAALDAGVAFMGVALYFTLQSNGIFGPAWWGLDADHCPLAKCPTAPGVQANGCPLL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03363 778 MobiDBLite consensus disorder prediction 1 42 - -
Spst1g03363 778 MobiDBLite consensus disorder prediction 1 55 - -
Spst1g03363 778 NCBIfam small oligopeptide transporter, OPT family 56 743 IPR004648 GO:0055085
Spst1g03363 778 Pfam OPT oligopeptide transporter protein 78 740 IPR004813 GO:0035673
Spst1g03363 778 PANTHER ISP4 LIKE PROTEIN 49 776 IPR004648 GO:0055085
Spst1g03363 778 NCBIfam OPT family oligopeptide transporter 62 742 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03363 Spst-Chr1 42244956 42247626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03363 56 778 Organic Solute Cotransporters AT4G26590 67.680 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03363 - - gmx:100820498 1450.26