Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03360 ATGGCTATTGCTGCAGCGGTTGTCGTCGTGCCATTGGGTCTACTCTTCTTCGCTTCCGGCCTACTTGTCAATCTCATTCAGATTCATACCTGCATATCAGCGTGTAAATGGGAGGTTCCACCAACATCTGGGGACTCTCTTAAATTCATACAGGAGTTTTCTACATACGGACTGGAAGAAGCGATATGCTATGTTGTTGTAAGGCCGGTGTCCAAGAATTTGTACCGACGGATCAACCGGCTTGTTGCTGAACTGTTGTGGCTGGAACTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCATGAGACCTTTCACTTAATGGGTAAAGAGCATGCGCTTGTGATAAGCAATCACAAAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGTTCAGGTTGTCTTGGCAGCACTTTAGCTGTGATGAAGAAATCTTCAAAACTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACGTTAAGGTCAGGTATCCAACGGCTGAGTGATTTTCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTAATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGACGTAACAGTAGCTATCCCTAAGAGTTCCCCTGCACCTACAATGCTAAGACTCTTCAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGCGGCATTTGATGAAGGGATTGCCAGAAAAAGATGAGGCCGTTGCTCAATGGTGTCGAGATATATTTGTGGGCAAGGATGCTCTGTTAGACAAACATATGGCTGAGGATACTTTTAGTGACAAAGAGCTGCAGGAGACTGGTCGACCGATGAAGTCTCTTCTGGTAGTTATATCTTGGGCCTGTCTGCTTGTTGCCGGGTCTGTAAAGTTCCTACATTGGTCTTCGCTACTATCTTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGATTGGCAGTTGTTACTGCACTTATGCAAATTATGATTCAATTCTCACAGTCGGAGCGTTCAAACCCTACCAAGATCGCCCCTGCTCAGTCAAAACACAAGGGAGAAGAACTAGAGGCTTTGAATGACAAGCAAAAGTAG 1263 0.4481 MAIAAAVVVVPLGLLFFASGLLVNLIQIHTCISACKWEVPPTSGDSLKFIQEFSTYGLEEAICYVVVRPVSKNLYRRINRLVAELLWLELVWLIDWWAGVKVQIFTDHETFHLMGKEHALVISNHKSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKLLPVIGWSMWFSEYLFLERSWAKDESTLRSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLFKGQPSVVHVHIKRHLMKGLPEKDEAVAQWCRDIFVGKDALLDKHMAEDTFSDKELQETGRPMKSLLVVISWACLLVAGSVKFLHWSSLLSSWKGVAFSAFGLAVVTALMQIMIQFSQSERSNPTKIAPAQSKHKGEELEALNDKQK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03360 420 SMART plsc_2 119 241 IPR002123 GO:0016746
Spst1g03360 420 Pfam Acyltransferase 116 261 IPR002123 GO:0016746
Spst1g03360 420 CDD LPLAT_LCLAT1-like 95 286 - -
Spst1g03360 420 MobiDBLite consensus disorder prediction 395 420 - -
Spst1g03360 420 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 77 285 - -
Spst1g03360 420 Pfam Acyltransferase C-terminus 272 345 IPR032098 -
Spst1g03360 420 MobiDBLite consensus disorder prediction 404 420 - -
Spst1g03360 420 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03360 Spst-Chr1 42213088 42223051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03360 1 420 Miscellaneous Gene Families AT3G57650 67.612 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03360 K13523 - gmx:100792858 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03360 1 42213088 42223051 Spst1g03360 1 42213088 42223051 ECH
Spst1g03360 1 42213088 42223051 Spst7g00298 7 2320768 2328118 PCT