Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03346 ATGAAAGAGATTGAGAAGAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCGAGGAAAACCGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCTTCCAAAACATTGAATGAAAAAGGAATTGAATCTAAGACACCCCATGATAGTAGACCAACTGCAAATAATATTATTAGTGATTCAAACGCGGCCTCAGAAAATTCGGAAACTTTTGAAAATGTGGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGAGGCACTTGCCGAGATGAAAGTTAATGAAATGGTTGCCAATGAAAACAAAAGTGAAGTGGCTGATGATCATTCTACTGATTTGGAGAAAGAGCAGAAGGAAGGGAATGAAGAAGTATCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCCCAAGGTGATTCTTTCACAAATGAGGATGAGAGAACAGAAAAGACTTCAAAGGATCCTAAAAGTAAGGTTAAAGTGAATCCTTCAGAAAACAACCGTGGGTCAAAGGAGAGATCTGATAGAAAAACAAATAAATTGCAATCAAAGTTATCGTATAGCAATCAAAAGAAACCTATGAACTCAAATAAAGGGTCCTCCAAAGCGTCAAACAAAAATACTTCCTCAACCAATTCTAAGACTGTGAAAGTTCCTCTAAATGTTTCGTCAGAATCTTCTGAAGGTGTTGATGAAAAACCTGTTCAAGAGATCAAGGAACTTGATATTGTGGATGGATCCTCCAATGGTGCTCAGAGCATAGGAAGTGAAGATGAAAGTCATGAATCAGTTAATGCTGAAGAAAATGGTGAACATGAGGACGAGGCAGCTGCAGAATTAAAAATCGAAGAAATGGAATTACGAATTGAAAAGCTCGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAACATGGAAGCTCAGCACACAAGGTGCACACACCAGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGTAAGCATTGGACCCAAACAAGGCGTGCAACAATTGCCAAGAATACTGTTTCTGGCCTCATTTTGGTTGCTAAGTCTTGTGGTAATGATGTTTCACGGTATGTGTGTTTTATTATAATTCTATCATTTACTGATTTGAACATGGGCAATAAATATTTCCTTGGTTTGTGTTTTAGGTTAACTTTCTGGTTGTCGAATACCATTGTGCTGAGAGAGATAATTTCACAAGCTTTTGGGAATTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCCGAGTCAAATGGGGCTGGCAAGAGAAATGATGGGAAGTATATGGCACTGAAATGGAAAGGTAGCTCCAATGGTAAACCAGGAAATGGTTTTATGCCTCTCGTCGAAGATTGGCAAGAGACAGGAACCTTTACCTTCGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTACATGCAGACTCCAGTTGGGGACTCTTCAAATAAATCTAATGGGAAGCTGTTGGGACCTGCTCTGGGTGATCACAGTCAAGGAAACTTTTCCATCAATCTCTGGAGAAATGCTTTCCAAGATGCCTTTCAAAGACTCTGTCCCGTTCGAGCAGGAGGACATGAGTGTGGTTGTTTGCCCATATTAGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGATATTGCTATGTTCAATGCTATTCTTCGGGAGTCAGCACTTGAGATCCCAACTGATCCTATATCAGATCCTATTGTGGATTCAAAGGTTTTGCCAATTCCAGCTGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTAACTGACATGTTTGGCATGGATGTTGAAGATTTTCTACAAGAAGAGCAGGAGAACAGTGAGAATGATGAAAAGCAGGGTGTAGATGGTGAACCTAAATCTTTTGTTCTCCTTAATGACTTGAGTGACCTTCTGATGCTACCTAAAGACATGCTTATAGACAGAAAAATCAGACAGGAGGTGTGTCCGTCCATCAGTCTTTCATTGGTTATACGGGTTCTCTGTAACTTCACTCCTGATGAGTTCTGTCCAGACCCTGTTCCAGGAACTGTCTTGGAGGCCCTGAATGCAGAGACTATTATAGAGCGAAGATTGTCAGCAGAACCTGTAAGAAGCTTCCCCTATGTGGCTGCTCCCGTTGTGTACATGCCTCCCTCATCTGCTAATGTGGCAGAGAAAGTTGCAGAGGCTGGAGGAAAGTGTCACTTGGCAAGAAATGTATCAGCTGTTCAGAGGAGAGGATACACCAGTGATGAAGAGCTAGAGGAACTTGATTCCCCTCTTACATCCATCATTGATAAGCTTCCTTCATCTCCAACTGTCACTCATAGTGGAAAAGGTAATCATCACAACGAGCAAGGGGGCCACCCCACCACAAATGCTAGATACCAACTCCTACGTGAAGTTTGGTCCATGTGA 2517 0.4152 MKEIEKRKASRNSQTKGSRKTERRENKLHQDNSSKTLNEKGIESKTPHDSRPTANNIISDSNAASENSETFENVVIHYVDDVNRSEEEALAEMKVNEMVANENKSEVADDHSTDLEKEQKEGNEEVSDAETVKDSVSSQGDSFTNEDERTEKTSKDPKSKVKVNPSENNRGSKERSDRKTNKLQSKLSYSNQKKPMNSNKGSSKASNKNTSSTNSKTVKVPLNVSSESSEGVDEKPVQEIKELDIVDGSSNGAQSIGSEDESHESVNAEENGEHEDEAAAELKIEEMELRIEKLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTQTRRATIAKNTVSGLILVAKSCGNDVSRYVCFIIILSFTDLNMGNKYFLGLCFRLTFWLSNTIVLREIISQAFGNSCQASPLKRLAESNGAGKRNDGKYMALKWKGSSNGKPGNGFMPLVEDWQETGTFTFALERVESWIFSRIVESVWWQALTPYMQTPVGDSSNKSNGKLLGPALGDHSQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPILARMVMEQCIARLDIAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDVEDFLQEEQENSENDEKQGVDGEPKSFVLLNDLSDLLMLPKDMLIDRKIRQEVCPSISLSLVIRVLCNFTPDEFCPDPVPGTVLEALNAETIIERRLSAEPVRSFPYVAAPVVYMPPSSANVAEKVAEAGGKCHLARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPSSPTVTHSGKGNHHNEQGGHPTTNARYQLLREVWSM 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03346 838 MobiDBLite consensus disorder prediction 1 69 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 1 47 - -
Spst1g03346 838 Coils Coil 277 304 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 262 276 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 144 182 - -
Spst1g03346 838 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 256 836 IPR021827 GO:0005643
Spst1g03346 838 MobiDBLite consensus disorder prediction 48 69 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 96 276 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 183 231 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 103 131 - -
Spst1g03346 838 MobiDBLite consensus disorder prediction 803 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03346 Spst-Chr1 42081662 42085603 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03346 - - gmx:100804499 1368.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03346 1 42081662 42085603 Spst1g03346 1 42081662 42085603 ECH