Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03344 ATGGCACCAAGATGGAAAGGAAAAGATGCACAAGCTAAAAAGGATGCAGAAGCTGAGGCGCTCAAGGAACCCATGTCAAAGATTGTATCTCAACTTAAGTCTTCTCTAGTTCAATCAGATATTTGCGGATTTCTCTCTGATAATAATGTACAGTTAGCAGTGGGAGCAGAACAACTTGATCTGTTTGATAAAGCATGTTTTGGTCGACCTGTGAGAACAATTGAAAAGGACAAACACTGGTTTCAATTAAGCTTTGAGGAGGCATTCTACCTATGCTATTCCTTGAAATGCCTTAAGATTAATGGCAGTGATACTGGTTCCCAAAATGATGAAGAGCTGTGGCATTACATGAAGTCCCGTAAAGAAACATTCCCTTGTTTCTACAAGGCTTATTCCCACCTTCGAATGAAAAACTGGGTAGTGAGGTCAGGATCTCAGTATGGTGTAGACTTCGTCATCTATCGACATCATCCAGCTCGTGTCCATTCTGAGTATGGTGTGCTTGTTTTATCAGATGGGGAAGATAAAGATCTAAATGGAAGATTGAGAATATGGTCTGATGTTCATTGCACAACTCGACTTGTTGGAAGTGTTGCAAAAATCTTATTGGTTTTACATGTCAATAGAAATGGTAACAACAACGACTCTCCGTTATGTCTGGCAAACCATACCGTTGAGGAGCGCACAATCACCAGATGGAGTCCAGAGCAGAACCGTGAGACGATGTAG 729 0.4129 MAPRWKGKDAQAKKDAEAEALKEPMSKIVSQLKSSLVQSDICGFLSDNNVQLAVGAEQLDLFDKACFGRPVRTIEKDKHWFQLSFEEAFYLCYSLKCLKINGSDTGSQNDEELWHYMKSRKETFPCFYKAYSHLRMKNWVVRSGSQYGVDFVIYRHHPARVHSEYGVLVLSDGEDKDLNGRLRIWSDVHCTTRLVGSVAKILLVLHVNRNGNNNDSPLCLANHTVEERTITRWSPEQNRETM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03344 242 Pfam tRNA intron endonuclease, N-terminal domain 43 114 IPR006678 GO:0000213|GO:0006388
Spst1g03344 242 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 3 73 IPR006676 GO:0000213|GO:0006388
Spst1g03344 242 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 123 212 IPR036167 GO:0006388
Spst1g03344 242 CDD tRNA-intron_lyase_C 128 212 IPR006677 GO:0000213|GO:0006388
Spst1g03344 242 Gene3D - 123 216 IPR011856 GO:0003676
Spst1g03344 242 FunFam tRNA-splicing endonuclease subunit Sen2-1 123 219 - -
Spst1g03344 242 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 212 IPR006677 GO:0000213|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03344 K15322 - gmx:100810335 409.838