Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst1g03341 | ATGCTGTCTGACTTAGAAGCTGATTTTATAAACCCATATGATGCTTCATCAAGGATTAATTACATCATCGTTCCCGAGTTTATTGGGCAGGGATTATTGTGCGCTTTCTGCCTTTTAACAGGTCACTGGATCATGTTTCTGATGACGATTCCGGTTACATGCTATCATGTGATGCTGTACATGAAACAACAGCATCTCATTGATGTTACTGAAGTGTTTCAAGCACTTGACTCTGAGAAGAAATTTCGCATAGCCAAACTTGCTTATTACTTAACAATCATCATCATAACTGTCTTCAGGGACATACATGATATGGACGTCCTTCCTATTGGCCTCTCCACAATACCAAACCTTGATCCAGGCTATCCAGTCCTCTCTGCTTACATATCTCCATTATCTTGTCTCTAA | 408 | 0.3995 | MLSDLEADFINPYDASSRINYIIVPEFIGQGLLCAFCLLTGHWIMFLMTIPVTCYHVMLYMKQQHLIDVTEVFQALDSEKKFRIAKLAYYLTIIIITVFRDIHDMDVLPIGLSTIPNLDPGYPVLSAYISPLSCL | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst1g03341 | 135 | PANTHER | CORNICHON-RELATED | 2 | 99 | - | - | |
| Spst1g03341 | 135 | SMART | Cornichon_2 | 1 | 99 | IPR003377 | GO:0016192 | |
| Spst1g03341 | 135 | Pfam | Cornichon protein | 1 | 99 | IPR003377 | GO:0016192 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst1g03341 | Spst-Chr1 | 42016016 | 42018693 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst1g03341 | K20368 | - | gmx:100527262 | 186.808 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst1g03341 | 1 | 42016016 | 42018693 | Spst1g03341 | 1 | 42016016 | 42018693 | ECH |