Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03332 ATGATCCACGAAGCCATGCGCTACACGCTCGTCAGCGGCGGCAAGAGGATCCGCCCGGTGCTCTGCATCGCCGCGTGTGAGCTCGTCGGTGGCAACGAGGATACCGCTGTCCCCGCCGCGTCCGCCGTCGAGATGGTCCACGCAATGTCGCTCATCCACGATGACTTGCCCTGCATAGACAACGACGATCTCCGGCGAGGGAAGCCGACGAGCCACAAGGTCTTCGGCGAACACGTGGCAGTCCTTGCCGGCGACGCGCTGCTAGTGCGCGCGTTCGAGCACATGGCGGCGTCAACGAAGGGCGTGCCTCCCATGCGGGTGGTTCGCGCGATAGGGGAGTTGGCAAAATCGGTGGGCGCGGAAGGCCTTGTGGCGGGACAAGTGATGGATGTGAAACCGGAAGGGTTGTCAGGTGACGTGGGTTTGGAGAGAGTGGAGTTCATTCACCTTCACAAATCCGCGGCGTTGGTGGAAGGTGCGGTTGTGTTGGGAGCAATAATGGGGAGTGGGTCGGAGGAGGAAGTTGAGAGATTGAGGATGTTTGGTAGGTGCATTGGGTTGATGGGTCAGATTGTAGATGATATTCTGGATGTTACTAAATCGTCTGTGGAATTGGGGAAGACGACGGGGAAGGACATGGTGGCTGATAAACTCACTTATCCCAAGGTTCTGGGGCTTCATAAGTATATGGAGATTGCTCATAAATTGGTGGAGGACGCCAAGGAAGCCTTGGCTTTGTTTGATGCCCAAAAGGCAGCTCCACTACTTGCCGTAAGTAATTACATAGTAGACAAAATTAATTAA 804 0.5572 MIHEAMRYTLVSGGKRIRPVLCIAACELVGGNEDTAVPAASAVEMVHAMSLIHDDLPCIDNDDLRRGKPTSHKVFGEHVAVLAGDALLVRAFEHMAASTKGVPPMRVVRAIGELAKSVGAEGLVAGQVMDVKPEGLSGDVGLERVEFIHLHKSAALVEGAVVLGAIMGSGSEEEVERLRMFGRCIGLMGQIVDDILDVTKSSVELGKTTGKDMVADKLTYPKVLGLHKYMEIAHKLVEDAKEALALFDAQKAAPLLAVSNYIVDKIN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03332 267 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 2 264 - -
Spst1g03332 267 SFLD Isoprenoid Synthase Type I 2 264 - -
Spst1g03332 267 SUPERFAMILY Terpenoid synthases 2 245 IPR008949 -
Spst1g03332 267 CDD Trans_IPPS_HT 2 264 IPR000092 GO:0008299
Spst1g03332 267 SFLD Polyprenyl Transferase Like 2 264 - -
Spst1g03332 267 FunFam Geranylgeranyl diphosphate synthase 1 267 - -
Spst1g03332 267 ProSitePatterns Polyprenyl synthases signature 1. 51 67 IPR033749 -
Spst1g03332 267 Gene3D Farnesyl Diphosphate Synthase 1 267 IPR008949 -
Spst1g03332 267 Pfam Polyprenyl synthetase 2 229 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03332 Spst-Chr1 41940714 41941517 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03332 K13789 - gmx:100798663 389.037