Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03329 ATGCTAACTACGTTTAGATTGTGCTTTCTCACGCTGTTGTTCTTCTCCCCAGTTGCGTTTTGTGAACTGTGCAACCCACAGGACAAGAAAGTGTTGCTGCAAATCAAGAAGGATTTCAGCAACCCATACCTTCTAGCCTCGTGGAACCCTGACACTGATTGCTGCAAATGGTACTGTGTCAAGTGCGACCCCAAAACGCACCGCATCAACTCCCTTGTCATTTTATCCTCTGTTCCCGAAACAAATTTCTCCGGCCAAATACCACCTTCCGTCGGTGACCTCCCTTACCTGGAGACCCTCGAATTCCATAAGCTTCCTAAACTCACCGGCCCAATCCAGCCCACCATCGCCAACCTCACAAAACTCAAGGAGCTCTATATTAGCTGGACCAACGTTTCCGGCCCAGTGCCCCATTTTCTGGCCCAACTCACCAATCTCCAGTTTCTCGACCTTTCCTTTAATAACCTCTCCGGCCCCATACCTAGCTCGCTTTCCCAGTTGCCTAACCTGTTGTCCTTACGCCTGGATCGGAACAAGCTCACGGGCCCCATCCCGGACTCCTTTGGATCTTTCAAGAGGCCTGGCCCAAGCCTTTTGCTGTCCCACAACCAGCTTTCCGGGCCCATTCCCGGTTCCTTGGCCAACATAGACCCACAACGGATAGACTTTTCAAGGAACAAACTGGAAGGCGACGCTTCGATGCTTTTCGGAAGCAACAAAACGACGCAGATGGTCGACGTTTCGAGGAACTTGTTGGCGTTTGATTTATCCAAAGTGGAGTTCCCTACCAGCTTGATATCGTTGGATTTGAATCACAATAAGATCACTGGAAGCATTCCCGTGGGATTGACCGCAGTGGATTTTTTGCAGGGTTTCAACGTGAGCTATAATGGACTTTGTGGTGAGATACCGCAGGGTGGACGACTGCAGAAGTTTGACGTGGATTCGTATTTTCATAACAAGTGCTTGTGTGGATCCCCCCTTCCCAGCTGCAAATGA 999 0.5005 MLTTFRLCFLTLLFFSPVAFCELCNPQDKKVLLQIKKDFSNPYLLASWNPDTDCCKWYCVKCDPKTHRINSLVILSSVPETNFSGQIPPSVGDLPYLETLEFHKLPKLTGPIQPTIANLTKLKELYISWTNVSGPVPHFLAQLTNLQFLDLSFNNLSGPIPSSLSQLPNLLSLRLDRNKLTGPIPDSFGSFKRPGPSLLLSHNQLSGPIPGSLANIDPQRIDFSRNKLEGDASMLFGSNKTTQMVDVSRNLLAFDLSKVEFPTSLISLDLNHNKITGSIPVGLTAVDFLQGFNVSYNGLCGEIPQGGRLQKFDVDSYFHNKCLCGSPLPSCK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03329 332 PANTHER POLYGALACTURONASE INHIBITOR 1 11 332 - -
Spst1g03329 332 FunFam Polygalacturonase inhibitor 1 22 332 - -
Spst1g03329 332 Gene3D Ribonuclease Inhibitor 22 332 IPR032675 -
Spst1g03329 332 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Spst1g03329 332 SUPERFAMILY L domain-like 23 331 - -
Spst1g03329 332 Pfam Leucine Rich repeat 263 277 IPR001611 GO:0005515
Spst1g03329 332 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03329 Spst-Chr1 41928231 41929229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03329 7 330 Receptor kinase-like Gene Family AT2G15080 30.601 3.56e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03329 - - gmx:100799184 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03329 1 41928231 41929229 Spst1g03329 1 41928231 41929229 ECH