Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03307 ATGCAAGGAGGAAAGAAAGTAGGAGAATCCATGAAGGAAACAGCTTCAAACATTGGTGCTTCTGCCAAAGCTGGCTTGGAGAAGACCAAAGCCACTGTCCAAGAGAAGGCAGAAAGAATGACAGCACGTGATCCGTTGCAAAAGGAGATGGCGACCGACAAGAAGGAAGCAAGGGTCACCCAGGCTGAGCTGGACAAGCAGGCGGCGCGTGAGCATAACGCTGCCGCGAAGCAGTCGGCCACCGCGGGGCATATGGGACAGGGGCATTACACCACCGGAACGGGGACCGGAACCGCCACGTACTCTACCACCGGGGGGCATGGTCATCTCCCCGGGGTTCACCAGACGTCGGCGATGCCGGGTCATGGAACTGGGCAGCCCACGGGCCATGTGACCGAGGGAGTGGTGGGCTCGCACCCCATTGGGACCAATCGAGGACCGGGTGGGACTGCTACGGCCCATAATACTCGTGCAGGTGGAAACCCGAATGATTATGAGTATGGGAGTGGTGGTACTTACAGTTAA 525 0.581 MQGGKKVGESMKETASNIGASAKAGLEKTKATVQEKAERMTARDPLQKEMATDKKEARVTQAELDKQAAREHNAAAKQSATAGHMGQGHYTTGTGTGTATYSTTGGHGHLPGVHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYEYGSGGTYS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03307 174 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 156 IPR005513 GO:0009793
Spst1g03307 174 MobiDBLite consensus disorder prediction 84 105 - -
Spst1g03307 174 MobiDBLite consensus disorder prediction 29 72 - -
Spst1g03307 174 Pfam Late embryogenesis abundant (LEA) group 1 9 78 IPR005513 GO:0009793
Spst1g03307 174 MobiDBLite consensus disorder prediction 1 174 - -
Spst1g03307 174 Coils Coil 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03307 Spst-Chr1 41670222 41670933 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03307 - - gmx:547828 279.256