Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03300 ATGAGCAGCGCCATTTTCAAAGCTTCAACCAGCACTAATCTTCATTCCTCTCTCAGAGCCGCACTCTTCCATTCAACCCCTCCCTTGCAACGTAAACGGCGTAATTTTTGGGACTCCAGAGGCCACAACCATAGCTCCAGAAGGTTTAGAAGGATGCAAGCAAAACATAGAGTAATGAACAGTATTAATGATTATGCAGAATCCCTGTTTCAGAGCTGGAAGCAGGGTATTGATACAGACAAGCTGCCATCAAGTCAAGACACCTCACGGTTTGATAAAAAACAATATTTTGATGGGGGCTCTGGAAGGTACAGGAATGGCAAGCAAGGATCAAATCAACGGTACAGAAGAGATCCATTGTTTTGTGAAGATAATTTTGATGTTGAAACCATTTTCCATTCTGCCTTTGGTGGGAATAGATTCTTCTATTGGTCCTTCATCGAGGAGGAAAATCCTCAGTGGAGGAGGTCTGAACGCTTTTCTAATTTTGGGAAATCTTGGAACTGGAGATATAGAAGCGAAAATGATTATGACTCTTCATCGGAGTCAGATAGTTCTGCCTCAGATTTAGCTCCCCATAGATTAGCCCTTGGATTGAGTGCTTCTGGTCCTCTGAAACTTGAAGATGTTAAAAACGCGTACCGGGCCTGTGCTCTAAAATGGCATCCAGATCGTCATCAAGGGTCTTGCAAGGCTATAGCAGAAGAGAAGTTCAAGCTTTGCAGTGTAGCTTATCAATCTCTATGTGATAAGCTGGCATTGGGTTGA 768 0.4323 MSSAIFKASTSTNLHSSLRAALFHSTPPLQRKRRNFWDSRGHNHSSRRFRRMQAKHRVMNSINDYAESLFQSWKQGIDTDKLPSSQDTSRFDKKQYFDGGSGRYRNGKQGSNQRYRRDPLFCEDNFDVETIFHSAFGGNRFFYWSFIEEENPQWRRSERFSNFGKSWNWRYRSENDYDSSSESDSSASDLAPHRLALGLSASGPLKLEDVKNAYRACALKWHPDRHQGSCKAIAEEKFKLCSVAYQSLCDKLALG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03300 255 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 9 253 - -
Spst1g03300 255 SMART dnaj_3 191 253 IPR001623 -
Spst1g03300 255 CDD DnaJ 207 250 IPR001623 -
Spst1g03300 255 Gene3D DnaJ domain 196 250 IPR036869 -
Spst1g03300 255 SUPERFAMILY Chaperone J-domain 145 250 IPR036869 -
Spst1g03300 255 Pfam DnaJ domain 205 251 IPR001623 -
Spst1g03300 255 MobiDBLite consensus disorder prediction 85 99 - -
Spst1g03300 255 ProSiteProfiles dnaJ domain profile. 192 253 IPR001623 -
Spst1g03300 255 MobiDBLite consensus disorder prediction 80 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03300 Spst-Chr1 41569280 41572730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03300 - - gmx:100807880 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03300 1 41569280 41572730 Spst1g03300 1 41569280 41572730 ECH
Spst1g03300 1 41569280 41572730 Spst7g00245 7 1897943 1900588 PCT