Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03297 ATGGAGAAGATGGAACATTTCAGCCATATCCACCCTCTTCTATTAAAGTGGGAACTGAGAAATGTCAATGAGCGAGTCATTTGCTCAGGTTGTGAAAAAACAATTTCAGGTCCTGTATTCAGCTGCGATCAATGCAACTATATCCTTCACAAAACATGTGCAGAAATGGCACGTCATGTAAAACACCCATTTCATCCTGAACACCCCCTTGTTCTCCTTTCCACCTCCCCTTATGAAGCACCCTACATATGTGATTCTTGTAGAGGTCGCTTCCAAAAATTCGTGTACCATTGTTATATCTGCAGTTATGACCTTGACGTGTCATGTGCTGCTCAGTGCAACCCAGATGATGGTCATGAGCACGAGTTTATGTCAGTGACTAATCCACAATCGTTTGTCTGTTATGCTTGTGGATTGCAAGGAAACGCGGGTCGCGCTTGCCTATGCACCATTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCCTACTGTTAGAATAAAAAGCCATGACCACCCTTTGAAACTCACTTATGCCCTTCATCACGTTTATGGTTTCTGGGGTAACATAACTTGTGGTGTTTGTGATGGAGCAATGAGTGCAGCTTTTGCGGGCTACTTTTGTTCAACGTGCGGATTTCCCGTGCATTTGAAGTGTCCACAACAAGATTTAAGAGATGAGTGTGAGGCCGCAACAGAAGATGAGGAATCATCCACGGACTACGAAATTGAGGAATCCTTGGATATTGATTTTACTTGTAATTTCTTTGGTCATGAACATTTGTTAAAGTTGACGGATGAAGAGAGTGATCTGCCATATTCTGGTAAACTCTGTGATGGGTGTATCCAACCCATCATGCCACCATTCCTTTCTTGTGAAGAAGAAAATTGCGGATTCTTTTTGCACCAAAGTTGTGTTGAATTACCTAGAACAAAACAACACCCGTTTCATGCACACCCTCTAACCCTTCTCCCCAAGGCACCTAATTATGATGGCATTTACAGGTGTGATGGATGCAAAAGATTGAGCAATGGTTTTGTGTATCGTTGTGATGTGTGTCAATTCGACCTTGATGTTTGTTGTGGGTCCCTTCAAGAGAGAATTGAACATGAAAGTCACATGCATCCCTTGCTCCTCAAGAAGACAACCGTTGCTAGGCAATGCATAGGTTGTCATCGTTGGTCGAAGCATGTATTTATGTGTGATGTTTGTGAGGATTTTGCTATTGATTGTGGATGTGCTACTCTACCGCGTAAGGCATGGCACATGTATGACAAGCATCCTCTAAGTCTGAACTATTTTGTTGAAGGGGGTTTGAGGGAATATGAATGTGGCATTTGCAATGAAAAAACAAGTCCGAAGCAATGGCTTTACTACTGTGATGACTGTGACTCTCGTGCTCATCCTTACTGTGTTGAAGGCAAATCTAGGCTTGTCAAGTTCGGAGGCAGTGTCCAATATGATGTTCACTCACACCCTCTAGATTTGGTTGAAGGAACAGAGCAGGAAACTACATGTGAAGCATGTGGTGAATGCTGCAATGGCTGGACTCTTGAATGTGACCAATGTAAATGCTACTTTCATCGAGAAGGACAGTGCTTTTGGAAAGAGTTTAGAAAGAGCGCAAAGTATTTGGAGTTGTCAGGAATTATGCGACACAGGTATGCAGCAAACGTGTTGGCCTCCACGCCCAATGTAACCACAAAGTGA 1716 0.4312 MEKMEHFSHIHPLLLKWELRNVNERVICSGCEKTISGPVFSCDQCNYILHKTCAEMARHVKHPFHPEHPLVLLSTSPYEAPYICDSCRGRFQKFVYHCYICSYDLDVSCAAQCNPDDGHEHEFMSVTNPQSFVCYACGLQGNAGRACLCTICQIWVHSSCAELPPTVRIKSHDHPLKLTYALHHVYGFWGNITCGVCDGAMSAAFAGYFCSTCGFPVHLKCPQQDLRDECEAATEDEESSTDYEIEESLDIDFTCNFFGHEHLLKLTDEESDLPYSGKLCDGCIQPIMPPFLSCEEENCGFFLHQSCVELPRTKQHPFHAHPLTLLPKAPNYDGIYRCDGCKRLSNGFVYRCDVCQFDLDVCCGSLQERIEHESHMHPLLLKKTTVARQCIGCHRWSKHVFMCDVCEDFAIDCGCATLPRKAWHMYDKHPLSLNYFVEGGLREYECGICNEKTSPKQWLYYCDDCDSRAHPYCVEGKSRLVKFGGSVQYDVHSHPLDLVEGTEQETTCEACGECCNGWTLECDQCKCYFHREGQCFWKEFRKSAKYLELSGIMRHRYAANVLASTPNVTTK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03297 571 SUPERFAMILY Cysteine-rich domain 395 479 IPR046349 -
Spst1g03297 571 SUPERFAMILY Cysteine-rich domain 294 377 IPR046349 -
Spst1g03297 571 SUPERFAMILY Cysteine-rich domain 31 111 IPR046349 -
Spst1g03297 571 Pfam C1 domain 317 363 IPR004146 -
Spst1g03297 571 Pfam C1 domain 63 110 IPR004146 -
Spst1g03297 571 Pfam C1 domain 170 221 IPR004146 -
Spst1g03297 571 Pfam C1 domain 7 54 IPR004146 -
Spst1g03297 571 Pfam C1 domain 259 308 IPR004146 -
Spst1g03297 571 SMART c1_12 15 59 IPR002219 -
Spst1g03297 571 SMART c1_12 119 166 IPR002219 -
Spst1g03297 571 SMART c1_12 180 230 IPR002219 -
Spst1g03297 571 SUPERFAMILY Cysteine-rich domain 146 222 IPR046349 -
Spst1g03297 571 SMART PHD_3 133 214 IPR001965 -
Spst1g03297 571 SMART PHD_3 27 88 IPR001965 -
Spst1g03297 571 SMART PHD_3 445 512 IPR001965 -
Spst1g03297 571 SMART PHD_3 279 342 IPR001965 -
Spst1g03297 571 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03297 - - vun:114181199 1072