Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03295 ATGGACAAGTTCAATTGTCGAAGTACTTTCACAAAAAGAGAAATGGGATCAGCACAGAAGGACCCAGGTGTTTTCCACTTTAGCCATCCACATCTTTTGGAATGCACCACCTCAACCTCCACAGCAAATATTGTACGTTGCTTTGGATGCAAGCTAAAAGTTAAGTGTGGTGAGGACTATTACCAGTGCAAAACATGTGCTTTCTCTCTTCACCATGTGTGCTGCAAGATGCCCTTAATCACAAGCCACCCTTCACATGCAAGCCACGATCTAGTCCTCCTTGTTATACCTTCCACCAATGCCACCCTCAACTGTGTCGCATGTGGGCACCATGTCACGGGCTTCTGCTACCACTGCGCTGAATGCAGCATCTTCTTTCATGCCTTGTGTCTTGCACTCCCTATCTCCCTCACAATCAAATACCACCCCCACAAAATCAAGCTTGAGTTTTCACCACCCTATGAGTTCTTCTGTGACTTGTGCAACAATCCCAGTAAAGACAATAACCGGTGGCTCTATAGGTGCAACATGTGTGAATTTGACACACATATAGCTTGTGCCGTCGACAACTTAGAGCCCCTTTTGTTTCAAAACCCATCTTTCCCTCAATCAAGCCCTTTGTTAAAGCAACTTACTAGTCTCCAAGTGGAACACAAAAAGTTCAATGCAAGTGTAGATAGTAGTTGCAAAGGGTATGAATATGAGATCATGAGTTTGGTAGCACAACAAATTGAAGGGGGAAGCAGAGAAAATCTTGATAGTGCAACCGCTGGATGGGACAAGAGATTGTATAGTAGTCCATGGAAAAAACATAACAGAACCGAGAGTGAGAAGATGAAGTTTGTTGAACTTGAATTACAAGAAAAAGAACTACGCCCTGCTGAACTTTTATCAAAATTAGAAGAAAGAACGCCACTTCGGGATAAATCGACTCCATTGTCTGACCATTCGGGCACAACGTTTAGTAACCAATATAGTGACTCATATTTTTCAATAGATTTGGCAAAGTCATATTCAGCCCATGCACGTAGAAGTCACGTACAAAAAGAAGGTGGTAATGACCAGATAACACGAGCAGCTACTATGCCACAGAGAATTAACGTTGTAAGCAATTCTGCACAACGAGAAGAACCATTCCTTCTACTAAATAATAAGCTGAACGCAGCTATTATCATCAAAGAAATACGAACGAGTGATGTTAGGAAATCAAGCCAGAGAGTGATGATGGAAAATTCTAATGAAAGCTCCTCTAAACAGATTGTTCAAGATCAAACAAGTGCTAAATCGGAGACAATGTGGGTGACTCAGGCGATTGATGACTTGACTAGTCTCATAAAGCAGATGCCTAAATGTTCAAATCTAATTAGAGAGAAACATCGTTTTCGTTTATCGTAA 1395 0.4165 MDKFNCRSTFTKREMGSAQKDPGVFHFSHPHLLECTTSTSTANIVRCFGCKLKVKCGEDYYQCKTCAFSLHHVCCKMPLITSHPSHASHDLVLLVIPSTNATLNCVACGHHVTGFCYHCAECSIFFHALCLALPISLTIKYHPHKIKLEFSPPYEFFCDLCNNPSKDNNRWLYRCNMCEFDTHIACAVDNLEPLLFQNPSFPQSSPLLKQLTSLQVEHKKFNASVDSSCKGYEYEIMSLVAQQIEGGSRENLDSATAGWDKRLYSSPWKKHNRTESEKMKFVELELQEKELRPAELLSKLEERTPLRDKSTPLSDHSGTTFSNQYSDSYFSIDLAKSYSAHARRSHVQKEGGNDQITRAATMPQRINVVSNSAQREEPFLLLNNKLNAAIIIKEIRTSDVRKSSQRVMMENSNESSSKQIVQDQTSAKSETMWVTQAIDDLTSLIKQMPKCSNLIREKHRFRLS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03295 464 PANTHER PHORBOL-ESTER/DAG-TYPE DOMAIN-CONTAINING PROTEIN 26 361 - -
Spst1g03295 464 Coils Coil 272 292 - -
Spst1g03295 464 Pfam C1 domain 84 130 IPR004146 -
Spst1g03295 464 Pfam C1 domain 140 187 IPR004146 -
Spst1g03295 464 SUPERFAMILY Cysteine-rich domain 55 144 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03295 Spst-Chr1 41526213 41529908 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03295 - - pvu:PHAVU_001G142900g 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03295 1 41526213 41529908 Spst1g03295 1 41526213 41529908 ECH