Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03287 ATGTCTGTGATAGGGGCGTATTCACATTTTGTGTGCGGAGAGGTTTATCAGAGAGATGAACAGTGGGCACAGTGCTTGGTAAGTGGGAGAGGGTATCTGTTTTGTCACAGGAGTGGGTGCAGGAACACATGGGTGGGAAGCAGAAACAGAGAAAGGAAGATGAAAAGGAGAAATTTGCGTGTGGAGGCGATGTGGCCAGATTTGTCAAGACCCAGTGAGCTTGAGATGGAAGAAATCAACGATTCTGAACACCTTGATCAAATTCTTCTTCTTGCTCGCAACAACTCACAACCTATCCTCATTGATTGGATGGCTACTTGGTGTCGGAAATGCATCTATTTGAAGCCCAAGTTAGAAAAATTAGCAGCTGAATATCACACCAAAGCCAAATTTTACTATGTGGATGTGAATAAAGTACCCCAGACTCTAGTCAAGCGAGGCAACATATCTCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTCATTGGAGGCCATAAGGCCTGGTTAGTTACTGAAGAAGTCAGAGAAATGATTCAAAAGTTTTTATGA 549 0.4335 MSVIGAYSHFVCGEVYQRDEQWAQCLVSGRGYLFCHRSGCRNTWVGSRNRERKMKRRNLRVEAMWPDLSRPSELEMEEINDSEHLDQILLLARNNSQPILIDWMATWCRKCIYLKPKLEKLAAEYHTKAKFYYVDVNKVPQTLVKRGNISLWKDGEMKAEVIGGHKAWLVTEEVREMIQKFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03287 182 Pfam Thioredoxin 94 165 IPR013766 -
Spst1g03287 182 Gene3D Glutaredoxin 67 182 - -
Spst1g03287 182 FunFam Thioredoxin 72 182 - -
Spst1g03287 182 SUPERFAMILY Thioredoxin-like 74 178 IPR036249 -
Spst1g03287 182 CDD TRX_family 83 179 - -
Spst1g03287 182 ProSiteProfiles Thioredoxin domain profile. 59 182 IPR013766 -
Spst1g03287 182 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 43 181 IPR044253 GO:0009570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03287 Spst-Chr1 41440581 41442430 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03287 - - gmx:100811965 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03287 1 41440581 41442430 Spst1g03287 1 41440581 41442430 ECH