Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03286 ATGGCTCGTTACGGCGAGGGCGACAAACGCTGGATCGTGGAGGACCGCCCCGACGGAACCAACGTCCACAACTGGCACTGGTCCGAGACCAACTGTCTCGAATGGTCCAGAACCTTCTTCTCTTCTCTTCTCTCCAACCTCACAATTCTCGACGGCGAGGGAAACCTTTTCGTCAAAACCACCTCGCTTCGCTCCCTCGATGGTGAGGCCTATGTTAACGTTCGCAAGGGTAAAATCATCCCCGGCTACGAGATCAGCCTCACGCTCAATTGGCAGGGCGAGGCCAAGGACTCCAACGGAGCTTCGCTTCTCCAAGTCGACGGCACCGTTGAAATCCCATACATCTCCGACGAGAACGCTGACGAGGATCCCGAACTCAAAATCACCGTCAACGACGAAGGACCGGTAGGGAAGAGGATCAAGGACGCAATGTTTTCCAAGGGGAAGCCCTTGATCTTGGAGAAGGTTAGGGTTTGGGTGCAGAGCATGGCCAACGGTGGTCCTGTTAAGGATGAATTGGACAACAAGAAGACAGCGCCAGTTCCATCACCGTCTCCTTCGCCTTCGCCGTCGCCGACGACTGTGGCTGGGCCGAAGAAAGAGAGTTCGGCGGGGCCGAAGAAGAAGAAGGAGAAGAAGGGAGTGAAGAGTATTAGCATGACGGAGAGGTTTAATTGCAGAGCTAAAGATTTGTTTGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTCACCCAGAGCAATGCGAGGATTAGTAAAGAGGTTGGTGGTGAGTTTAGCATTTTTGATGGATCCGTGTGTGGAACTAATTTGGAGTTGCAGGAGGGTAAGTTGATTGTGCAGAAGTGGAGGTTTGGAAGCTGGAACGATGGTGTTCAATCCACAGTAAGGCTTGTGTTTGAGGAGCCTGAAGCGGGTGTTACCGTTGTGAAGCTGACTCACACTGATGTGCCTGAAGAGGATAGGTATGGGAATGCAACTGTGGTGGAGAACACCGAAAGGGGGTGGCGGGATCTTATTTTCCAGAGGATACGTGCAGTTTTCGGTTTTGGAATTTGA 1059 0.5194 MARYGEGDKRWIVEDRPDGTNVHNWHWSETNCLEWSRTFFSSLLSNLTILDGEGNLFVKTTSLRSLDGEAYVNVRKGKIIPGYEISLTLNWQGEAKDSNGASLLQVDGTVEIPYISDENADEDPELKITVNDEGPVGKRIKDAMFSKGKPLILEKVRVWVQSMANGGPVKDELDNKKTAPVPSPSPSPSPSPTTVAGPKKESSAGPKKKKEKKGVKSISMTERFNCRAKDLFEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVCGTNLELQEGKLIVQKWRFGSWNDGVQSTVRLVFEEPEAGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03286 352 CDD SRPBCC_Aha1 217 350 - -
Spst1g03286 352 MobiDBLite consensus disorder prediction 167 216 - -
Spst1g03286 352 Gene3D - 215 351 IPR023393 -
Spst1g03286 352 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 164 IPR015310 GO:0001671|GO:0051087
Spst1g03286 352 Pfam Activator of Hsp90 ATPase homolog 1-like protein 228 348 IPR013538 -
Spst1g03286 352 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Spst1g03286 352 Pfam Activator of Hsp90 ATPase, N-terminal 29 164 IPR015310 GO:0001671|GO:0051087
Spst1g03286 352 Gene3D - 18 173 IPR036338 -
Spst1g03286 352 SUPERFAMILY Bet v1-like 217 351 - -
Spst1g03286 352 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03286 Spst-Chr1 41428533 41429783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03286 K26216 - gmx:100784184 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03286 1 41428533 41429783 Spst1g03286 1 41428533 41429783 ECH
Spst1g03286 1 41428533 41429783 Spst7g00235 7 1799812 1802080 PCT