Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03285 ATGTCTTTGGCACGCTCCATCCCCACCAAAACGCCATTGGAGCGCAAGCCAACTCCTCCATCCTCTCACTCTGACGTATTTGCCTCGTTCCGTTTCCGCGGCACCGTAATGAAGCGCAACCAGCGGTTCAAACGAGTCGCCAAATCCAGATTACCGGTTCGGAGTTCGCTCCCAGTCAAACCCAACCCATCACCACCACCACCAGACATTTCTCCCGTTGAAATGAAAATCTTGCCATGCGATTTCTTCCAAATCGACGCGCTGGACCTTGCCCCACGTTTACTGGGAAAGTTTCTTCGCCGAGACGACGTCGTTCTTCGTATCACGGAGGTTGAAGCGTATAGACCGAACGACTCGGCTTGCCACGGTCGTTTTGGTGTCACTTCAAGAACTGCCCCTGTCTTTGGAGCTGGTGGGCATGCGTATGTTTATCTTTGCTATGGTGTTCACATGATGCTGAATGTGGTTGCGGACAAGGAAGGTGCTGGAGCTGCTGTTCTGATACGCTCTTGTGCTCCGATTAGTGGATTGGACGTCATTCAACAGCGCCGAGGTCTGAAAACTGAGAAACCTATCCTTCTTACCGGTCCTGGGAAGGTTGGTCAGGCATTGGGTCTAACGACAGAGTGGTCCAACCATCCTCTCTATACACCTGGTGGTTTGGAAGTCTTAGATGGTCCAGAGCCGGAAAACATATTGGTAGGTCCACGTGTTGGTATCCAATACGCTTTGCCAGAGCATGTCAATGCCTTGTGGAGATTTGCCATTGCAGGCACCCCTTGGATTAGTGCTCCCAAAAATACTCTCAGACCTCCCTTCATCTCCCACAGTTATCCTGAGAAAAAAGCAACACGTTTTTCTACCAGTACCTTTGGCCGTAATGGCTTACCCTATCTGACCAACCCTCCTAGTCAGGAGTTGAATGTGGCACTAGAGAATGAGTTGGCGAGCATCAAGGTAACTGTAGCAGCTATACAAATCAAAACTGATGAGAAACAAGCTCAGCTCATAGTGTTCCTTACAAAGAACATCACCGAAGGAAAAGATGGGTCAGTGTTCAATGGACCCAAAAGCAAATGGACAACAAATGACAAAGCCGATGAGGTTAAGCAAATCTCAGAAACCAGACATTTTGGTGGAGTTTTGGGTCAGGTTATACAAACCAAAATGGGTCATCTAACCCAAGTAGCCCAAACACTATGGGCCGCAGTAATGGTCAAAGTGTCAATTGAAGATTATGCTATCAAAGCAACAATTGAAGATCATGCTATCAAAGAATCAAATGATGACGAGGGAGAAACTAATGTTCAATAA 1314 0.4772 MSLARSIPTKTPLERKPTPPSSHSDVFASFRFRGTVMKRNQRFKRVAKSRLPVRSSLPVKPNPSPPPPDISPVEMKILPCDFFQIDALDLAPRLLGKFLRRDDVVLRITEVEAYRPNDSACHGRFGVTSRTAPVFGAGGHAYVYLCYGVHMMLNVVADKEGAGAAVLIRSCAPISGLDVIQQRRGLKTEKPILLTGPGKVGQALGLTTEWSNHPLYTPGGLEVLDGPEPENILVGPRVGIQYALPEHVNALWRFAIAGTPWISAPKNTLRPPFISHSYPEKKATRFSTSTFGRNGLPYLTNPPSQELNVALENELASIKVTVAAIQIKTDEKQAQLIVFLTKNITEGKDGSVFNGPKSKWTTNDKADEVKQISETRHFGGVLGQVIQTKMGHLTQVAQTLWAAVMVKVSIEDYAIKATIEDHAIKESNDDEGETNVQ 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03285 437 Gene3D - 73 270 IPR036995 GO:0003677|GO:0003905|GO:0006284
Spst1g03285 437 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g03285 437 FunFam Putative 3-methyladenine DNA glycosylase 73 271 - -
Spst1g03285 437 SUPERFAMILY FMT C-terminal domain-like 75 268 IPR011034 GO:0003824
Spst1g03285 437 CDD AAG 82 263 IPR003180 GO:0003677|GO:0003905|GO:0006284
Spst1g03285 437 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 54 272 IPR003180 GO:0003677|GO:0003905|GO:0006284
Spst1g03285 437 NCBIfam DNA-3-methyladenine glycosylase 78 263 IPR003180 GO:0003677|GO:0003905|GO:0006284
Spst1g03285 437 Hamap Putative 3-methyladenine DNA glycosylase. 80 263 IPR003180 GO:0003677|GO:0003905|GO:0006284
Spst1g03285 437 Pfam Methylpurine-DNA glycosylase (MPG) 82 259 IPR003180 GO:0003677|GO:0003905|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03285 Spst-Chr1 41420436 41427495 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03285 K03652 - gmx:100813424 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03285 1 41420436 41427495 Spst1g03285 1 41420436 41427495 ECH