Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03284 ATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAGCTAGTCCATCGCTTGCTCTCTCAAAACCTCCCCTCCAATTCCCCGCCGATAAACCCTAAATCACCCGAATTCCGCAACTCCCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACTCCCTCCGTCGCTCCGGACGCAGCCGCCATCGCAGACTCCATCAAGCGCCGCCTCGCCACCCACGCCCGCTCTTCCGACGCCCTCTCCTTCGCCGACCTCTTCTCCAAATTCGCCTCCAAAGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTCAAAATCATCTCTGAGGATCGCCACAAAACCGCCTCCGCCGCCGCCACCACCACATCTCTCTTGCCCAACCTCGCTTTCTCCGAACCCGCTTCGAACAAAGGCTGGAGCAACGGCGTTTTACTTGTCTCCAAGGATCCCGACAACCGCCGCGACGTTGCGTTTCGCGAGTTCGTGAATTTGGTCAGGGAAGAAAACGAGGTGTTGGAAGAGGTTATCGTCAGGGACGTGCTCTATGCCTGCCAGGGAGTCGATGGTAGTTTTGTGAAATTCGAGAGCGAGAGTAAGCGTTATGTGATACCCGAATCGGTTAGGGTTCCGAGAGGCATTAGGAGTATGGTTCATAACCTTTGTGAATTGGGTGTTTTGTTTAGGAAGGTTAGTGGTTACATTTCCCAGAGTATGGATCGGTTTCCCAATGAAGATGTGGGAACTGTGGGGCAAGCTTTTTGTTCCGCTTTGCAGGATGAGTTTAGTGAGTACTATAAATTGTTGGCGGTTCTTGAGGCTCAGGCTTCGAACCCTATTCCTTTGGTTTCCGAATCTGCGAGTTCTGGTAACTATCTTTCGTTGAGAAGATTGGCGGTTTGGTTGGCTGAACCCTTGGTGAAGATGAGGCTGATGGCGGATTTGGTTGAGAAGTGTAGGGTTTTGCGCGGCGGGGCTATGGCGGGGGCGATTCATTTGCACGCGCAGCATGGTGATCCGTTGGTTCATGAGTTTATGAGGAGGTTACTGCAGAGAGTGTGTTCTTCGCTGTTTGAGATGGTGAGGAGGTGGGTCTTGGAAGGGGAGTTGGAGGATATATTTGCTGAGTTTTTCATTGTTGGGCAGCCTGTTAAGGCTGAGTCCCTATGGAGAGAAGGCTATAGGCTCCATGATGCGATGCTTCCTTCGTTCATTCCGCCTTCACTTGCTCAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGTGAGGATCGCGGTTGGGCGGATGCTGCCACCGAGGTTATCACTGATAATGAAGTGACAGCAAGAAGAGGGGGTTTTGGGTACGGGGAAACGGATACCCTTGAGTTTTTGGTGGATAAAGCTGCAAAAAGGATTGACAAGCATTTGTTAGATGTGATTTTCAAGAGGTATAAGTTCAAAGAACACTGTCTTGCAATTAAGCAATATTTACTGCTTGGCCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTTGGGCCTGAGCTTTCTGAGCCAGCTAACACTATTAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTAGGGCATCTAATGCTCAGTATGATGATCCTGAGATTTTGGACAGGCTCAGGGTTAAAATGATGCCGCATGAGAGCGGTGATAGGGGCTGGGATGTATTTTCATTGGAATATGATGCAAGAGTTCCACTTGATACAGTGTTCACAGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTGTGGAAGCTTAAAAGAGTGGAACATGCGCTTACTGGTGCCTGGAAGACCATGAAACCAAACTGTATTACTTCTAATTCTTTCACCAGATTGCAACATGCAGTAAAGATGCAATTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAGGTGTTGGAGATATCATGGTCAAATTTTTTGGCGGAGATGGAAGTAGCCAAGGATCTAGATGATCTACTTGCAGCTCACGAGAAATATCTGCATTCTATTGTAGAGAAATCTCTCCTTGGAGACCTTTCCCAATCTCTTTACAAGTCACTACTTGTTATTTTTGATCTTATATTACGTTTTCGGAGCCGTGCAGATCGGTTGTATGAAGGTATTCATGAGTTGCAATCAAGAATCACTGAATCCTCCCTATCTTCTCGAGACCAGAATAAAACACGATCACAGAGGCAACTGAATGATAAATCTGCTGAACAAGGATCCTGGATTGTTGATGGGAGGAAAGCTCTAACACAACGAGCTGGTGAATTTCTACGAAATATGGAACAAGATCTGGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGAATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATGGGCGGTTTTGTCCTAGCATGTAG 2535 0.4671 MEEEEDQQKLPDLVKELVHRLLSQNLPSNSPPINPKSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHARSSDALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHKTASAAATTTSLLPNLAFSEPASNKGWSNGVLLVSKDPDNRRDVAFREFVNLVREENEVLEEVIVRDVLYACQGVDGSFVKFESESKRYVIPESVRVPRGIRSMVHNLCELGVLFRKVSGYISQSMDRFPNEDVGTVGQAFCSALQDEFSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPLVKMRLMADLVEKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYRLHDAMLPSFIPPSLAQRILRTGKSINFLRVCCEDRGWADAATEVITDNEVTARRGGFGYGETDTLEFLVDKAAKRIDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPEILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGDLSQSLYKSLLVIFDLILRFRSRADRLYEGIHELQSRITESSLSSRDQNKTRSQRQLNDKSAEQGSWIVDGRKALTQRAGEFLRNMEQDLDAIAKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYGRFCPSM 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03284 844 MobiDBLite consensus disorder prediction 750 770 - -
Spst1g03284 844 Pfam Gamma tubulin complex component N-terminal 183 486 IPR041470 -
Spst1g03284 844 Gene3D - 491 836 IPR042241 -
Spst1g03284 844 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 837 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Spst1g03284 844 Pfam Gamma tubulin complex component C-terminal 492 837 IPR040457 GO:0043015
Spst1g03284 844 Coils Coil 791 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03284 Spst-Chr1 41416221 41418856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03284 K16570 - gmx:100784710 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03284 1 41416221 41418856 Spst1g03284 1 41416221 41418856 ECH