Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03275 ATGGCATCGAAACAAGGTGTGAAACCAAGAAGGTTCCGGTTGAGTGGCTCAAAAGGTGCTAATTCGCCTCCTTCTTCTACTACTTCGTCTTCTAAACAGTTTCTGGAGACATCGGTTGATGGCCAGAGTTCGCCGGCATCTTCGTCGGCTCGAAGTAAGCAACAGCATTTTAATGCAGAAACTGCTGCTGCACCTCCTTTAGAGGCACAGAGAGTGAAAGAAAATGTCACGGTGACGGTCCGGTTTCGGCCTCTGAATCCAAGGGAAATTCGTCAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATAGTGCGAAATGAGTATAACCCTTCCATAGCTTATGCATACGGGTCCCAAGAAGAACTCAGTAGAGATCGTGTCTTTGGTCCCACTACCACAACTCGCCAGGTCTATGATGTTGCTGCTCAGCATGTCGTTAGTGGTGCTATGGAGGGCATCAATGGTACGGTATTTGCATATGGGGTGACAAGCAGTGGGAAGACTCACACAATGCATGGTGATCAAAGATCCCCTGGAATTATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAATCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATATACAATGAGGTGGTTAATGACTTACTAAATCCAGCAGGACAGAACTTAAGAATTAGAGAGGATGCTCAGGGCACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCGCCTGCTCATGCATTGTCCCTTATTGCAGCCGGAGAAGCCGGATCATCAATTATAATTGATATCAAATTGGATCCTGAGCAGTTCAGGAACAAGAAAATGGAACATCAAGATACAATAGAGAGTAGTCCATGTGCTGAAAATAGCGAAGGAGAAGCGATAACACTTTCACAACTGAATCTCATTGATCTAGCAGGTTCTGAGAGCTCAAAAGCTGAAACTACTGGCATGAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACACTTGGAACTCCGAAGGTAGGATGGGCCTATGCATTTGCCAAGCTTCAAAGCCCAAAGGGTTTCTATGTGAGGAGGCACATTAGATGTGAAACATTCATGACTTCAAAACCTGGTTTACGGGGGCAAGGGTTGACTGAAGTTCAAGAAAAAACCCTACAGGGTGGTTCAACCTTGGATCAAATGGTGATAGGTTGTGAAGACATTTTGAAGGAGGGAGAGGGTAAAGAAAATGAGGGCCCGAGAGGTGTTTTAAGGGCTGCGCATCAAAGAGTACTGGAATACCAAAAACAAAGCGCGGAAAGAGGTGGAGCAGATTTAGTCTTTGCACTAGTTGGGTTCTGTGTCGATCAAAGAGATGCACCAGATCCGGTGCTTGTTGGAGATAACAGTGGCCATGAGACGATGGAGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCTTAAATGACCGCTCAATGATAAAGGAGGTTATTTCAAAATTGACTGAAGATAAAGCCAGTCACATACCTTATAGGGATTCCAAACTGACTAGAGTACTTCAGTCTTCGCTAAGTGGTCATGGACGTGTTTCTATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGAGGTATTGTTACAGTTCAACCAAAAGATACTGAGGATCATGACATTGAGCTCCTAAAACAGAAGTTAGAAGATGGTCAAGTTAAGTTGCAATCCAGATTGGAACAAGAGGAAGATGCAAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTAATTTTGGTCTCCACAAAAGCGTCACCATCTACAAGATTTCCTAACAGATCTGGTCCTCGTAGAAGACACTCCTTCGGGGAAGAGGAGCTGGCATACCTTCCGTACAAAAGGCGGGATCTAATCTTAGACGAGGAAAATGTTGATTTGTATGTTAATCTGGAGGGAAATGCTGCAATGGCTGATGATTCTTTTAAGGGTGAGAAAAAGATGAAGAAACATGGACTACTAAATTGGCTGAAGTTACGTAAACGAGATAGTGCCTTGACAGGCACAAGTGATAAATCTAGTGGAGCGAAATCTAGTAGCACACCTTCTACACCTCAAGCAGAAAGTAGTAATCATGTGGAGTCCAGACTTTCTCATTCTCAACCTGCAGAAAGCTCCCCCTCTGCTGATATAGCATCAGAGGCAAGAGAGGACAAATATATTCACGAAGACAGTTTTTTGGGGCAAGAGACTTCTTTGACAAGCATCAAGTCAGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATATTATCAGGAGAAGTAGCACTTCATTCAAGCGCTTTGAAGAGGCTGTCAGATGAAGCAACAAAAAATCCTCAGAATGGTCAGATTCATGTGGAGATGAAAAATTTGAAAGATGAAATTACAGCTAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCATTCGTTGCTTCAGATAAGACAGAACAGTCAGGAGCGTTGCAGACTGTTGCTGAGCTGATGGCACAATTGAATGAGAAATCCTTCGAACTCGAGGTCAAAGCAGCAGATAATCGTATAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGTGAAAGCCAGCAAGAAACAATTGCCTCCCTGAAACAGCAACTTGCAGATGCATCGGAGTTGAGAAGTTTCAGCCCTGTTGTCAACCATTCACAAAATTTGTCTGTAACCAAAGATTATCCTGGTGAAATTCACCTTGACAAGGGGAATTTGATGAATAACTATTCCAATGAAAGGATTCATTTGCAAGCACAGATAAGTGAGATAGAGGAGCTGAAGCAGAGAGTGGCAGAACTAGCAGAATCAAAGGAGCAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCATATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTTATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGGTGCATCCAAGAATTCAACAACTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGAGAAAGTCATGTTAGAGTTAGACGAAATGATCAGGGTGGATCAAACACCAACATCAAGAGAGAATTAGCCCTGAGCAAAGAAAGGGAACTTTCATATGAAGCTGCCCTTTTAGAGAGAGATCAGAAAGAGGCCGAACTTCAAAGAAAGGTTGAAGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTGGCTAACATGTGGGTCCTTGTGGCAAAGCTTAAAAAGTCACAAGGGGGTGAAACTGACGTTTCAGGGTCTACTACAGAGAGTTTGTTGGTGGATGGTTTTTGA 3435 0.4285 MASKQGVKPRRFRLSGSKGANSPPSSTTSSSKQFLETSVDGQSSPASSSARSKQQHFNAETAAAPPLEAQRVKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYGSQEELSRDRVFGPTTTTRQVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEAGSSIIIDIKLDPEQFRNKKMEHQDTIESSPCAENSEGEAITLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTPKVGWAYAFAKLQSPKGFYVRRHIRCETFMTSKPGLRGQGLTEVQEKTLQGGSTLDQMVIGCEDILKEGEGKENEGPRGVLRAAHQRVLEYQKQSAERGGADLVFALVGFCVDQRDAPDPVLVGDNSGHETMEDKLHRREGNSPDHQLRPLNDRSMIKEVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDTEDHDIELLKQKLEDGQVKLQSRLEQEEDAKAALLGRIQRLTKLILVSTKASPSTRFPNRSGPRRRHSFGEEELAYLPYKRRDLILDEENVDLYVNLEGNAAMADDSFKGEKKMKKHGLLNWLKLRKRDSALTGTSDKSSGAKSSSTPSTPQAESSNHVESRLSHSQPAESSPSADIASEAREDKYIHEDSFLGQETSLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATKNPQNGQIHVEMKNLKDEITAKSEQIDLLEKQISNSFVASDKTEQSGALQTVAELMAQLNEKSFELEVKAADNRIIQEQLNQKICECESQQETIASLKQQLADASELRSFSPVVNHSQNLSVTKDYPGEIHLDKGNLMNNYSNERIHLQAQISEIEELKQRVAELAESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELGASKNSTTERRTSGTVQNGRRESHVRVRRNDQGGSNTNIKRELALSKERELSYEAALLERDQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSQGGETDVSGSTTESLLVDGF 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03275 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 562 IPR027417 -
Spst1g03275 1144 Coils Coil 888 915 - -
Spst1g03275 1144 PANTHER CENTROMERE PROTEIN E 498 1114 IPR027640 GO:0003777|GO:0007018
Spst1g03275 1144 Coils Coil 820 840 - -
Spst1g03275 1144 Gene3D - 495 611 - -
Spst1g03275 1144 Coils Coil 536 563 - -
Spst1g03275 1144 MobiDBLite consensus disorder prediction 18 59 - -
Spst1g03275 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 341 IPR027417 -
Spst1g03275 1144 Coils Coil 998 1032 - -
Spst1g03275 1144 Pfam Kinesin motor domain 497 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03275 1144 Pfam Kinesin motor domain 81 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03275 1144 Gene3D Kinesin motor domain 25 343 IPR036961 -
Spst1g03275 1144 Coils Coil 946 990 - -
Spst1g03275 1144 MobiDBLite consensus disorder prediction 705 745 - -
Spst1g03275 1144 MobiDBLite consensus disorder prediction 1024 1062 - -
Spst1g03275 1144 ProSitePatterns Kinesin motor domain signature. 304 315 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst1g03275 1144 SMART kinesin_4 73 549 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03275 1144 MobiDBLite consensus disorder prediction 1024 1040 - -
Spst1g03275 1144 MobiDBLite consensus disorder prediction 1041 1055 - -
Spst1g03275 1144 Coils Coil 581 615 - -
Spst1g03275 1144 Coils Coil 1079 1110 - -
Spst1g03275 1144 MobiDBLite consensus disorder prediction 1 70 - -
Spst1g03275 1144 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03275 1144 PRINTS Kinesin heavy chain signature 154 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03275 1144 MobiDBLite consensus disorder prediction 702 749 - -
Spst1g03275 1144 ProSiteProfiles Kinesin motor domain profile. 75 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03275 Spst-Chr1 41294713 41320091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03275 477 859 Miscellaneous Gene Families AT5G06670 51.878 3.05e-104 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03275 K11498 - gmx:100815027 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03275 1 41294713 41320091 Spst7g00231 7 1744628 1762018 PCT