Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03274 ATGTCTGGAAAAGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGTCTTTCACATGCTTACATTCAGTATCCACCACTTCGCTGCAATGTTCCTGGATCTGGTGAATTATTTTATGATGATGGAAATAAGTTGGTACTCTCTTCAACATCTGACCAGGTCTTTTCATGGAAAGTCTGTCCCTTTGATCCTCTCATCGATCCAACTGCTGATTCAATAAGTGAAGGCCCTATTATAGCTATTCGGTATTCTTTAGATACAAAGGTAATAGCAATCCAACGATCGAACCTTGAAATACAGTTTTGGGATAGAGAGACTGGGGGTACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGCATAATTGGTTTTTTTTGGACAGATAGTCAACAGTGTGATATCGTTCTTGTTAAGACCAGCGGTCTAGACCTGTATGCATATAATTCGGAGTCGAACTCCCTCCAACTGGTGCAAGCAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCTTGGTTCTTCTTGCTTCTGGCATGCAGTGCAAGACATTCCACGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAGGATGTCTTTATTGTCACTGTTTACGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATCGGCTATATCGTGATGCAGTGATACAGCAGGGCTCTTTACCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTCGAGCACCAATATCTGCACCACTTCCTTTATTATTAAGGGGTTTCCCCAGATCCAGTACTTCATCTCAATCTAATGGTAGAGAAAGTGAGAGCTCAGATAGTAATGTTTTGAGTAGTCATGAAGCTGTTACATACTCCAATACATGGACTTTCCTAGTGCCTGACCTTGTATGTGATGTGGCCAATAAGTTATTGTGGAAGTTCAATTTAGACTTAGAGGCAATCTCCGCTAGTAGCTCGGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGAAGGTTGGAAGCTAACAAGTCCACAAGAGCTGTTACTACAGTACCAGTAGCTAAACAACTGTGCTTGGGTATAACACGTACACTAATTCTAGAGCATAGGCCAGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACTGGAAACTATCTCAAGGGACTGAAACCAGAGAAGACTTCAACTTCTGTTCAAAATACTGGTGCTGAGGTATCTGCTATCGAAACAGATGTAATTGGAAAATCAGTCATCCATGAATCTATGAAAAGAGTAGACAGTGGATCTGTTAATAAAGCTTCAACTGTTTCAAGTTTGGATTCTGAGGATGATTCTTGGTCTGCAAATCCAAAACACAATTCAAAGGCGGCCCATAGTGCTTATGTTGAACAATCATCTCTTCAGTCTGGGCAAGAGGAATCACAACTTACTTCTGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTCGGAGACCCTTCTTACTTGGTTGCGATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATACGTGTACTCCCAAATGTTTATGTATTAATAATTCAACTTTTGGCTCGCCATGAACGTTATGCAGAGCTTGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCCTCTAAGGAAGTTGCACTACAACTCCTTGAGTCTGGTCGCCAGAATGCCCAAGCTAGGAAGCTTGGTCTGGATATGCTGAGACAATTGGGTTTACATCATGATTATGTTTTGCTGCTTGTGCAGGATGGATACTACCTTGAAGCCTTAAGATATGCACGGAAATACAGGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCGAATGACTCTCAACATCTTGCTGCGGTTCTAAGATTCTTTGCAGATTTCCTTCCTGGCTTCAAAAACACCTCAGACCATAATAGATACTGCCGCATACTGAATGAAATGAACTCACCCATTACCCGTGAGTGA 2202 0.416 MSGKASTSKPNIGLSGSDGLSHAYIQYPPLRCNVPGSGELFYDDGNKLVLSSTSDQVFSWKVCPFDPLIDPTADSISEGPIIAIRYSLDTKVIAIQRSNLEIQFWDRETGGTFSHKCRPESESIIGFFWTDSQQCDIVLVKTSGLDLYAYNSESNSLQLVQAKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSNRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTSSQSNGRESESSDSNVLSSHEAVTYSNTWTFLVPDLVCDVANKLLWKFNLDLEAISASSSEVPSVLEFLQRRRLEANKSTRAVTTVPVAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGNYLKGLKPEKTSTSVQNTGAEVSAIETDVIGKSVIHESMKRVDSGSVNKASTVSSLDSEDDSWSANPKHNSKAAHSAYVEQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARHERYAELGLFVLNKILEPSKEVALQLLESGRQNAQARKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFADFLPGFKNTSDHNRYCRILNEMNSPITRE 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03274 733 MobiDBLite consensus disorder prediction 492 539 - -
Spst1g03274 733 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 725 IPR040371 GO:0010506|GO:0035658
Spst1g03274 733 Pfam Colon cancer-associated protein Mic1-like 565 704 IPR009755 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03274 K24763 - gmx:100500389 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03274 1 41235203 41259371 Spst1g03274 1 41235203 41259371 ECH