Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03268 ATGGCCAACGCCAAATACCTCACTTCCATTTTCACCATTATTATCACCCTTCTCTTCTCATTCACCACTGCTAAACCCCCTACTTTCCACCGAACCATATCTCCGACGTCTTTGGGCCTCAAGAAGGAGAAGCTCAGCCACCTTCACTTCTTCTTCCACGATATTGTCAGCGGCCCAAAGCCCACCGCGGTCAGAGTGGTCGAGCCCCGCAGCACCAACACTTCCTCCACGCTTTTCGGGCTCATGGCGATGATCGATGACCCATTGACCGTGAACCCCGAACCCGGATCCAAACTCGTCGGAAGGGCCCAAGGAATTTACGGATCTGCGGGCCAAGAAGAAATGGGCCTGTTGATGATCATGAACTTGGTGTTCACCGAAGGGAAATACAATGGCAGCACACTGAGCTTGTTGGGGCGGAACGCCGTGCTCTCCACCGTGAGGGAAATGCCAATCGTAGGAGGAAGCGGGGCTTTTCGGTTCGCACGTGGGTATGCTCAGGCCAAGACTCACACGTTTGATTTCAAGACAGGGGATGCTGTCGTGGAGTACAACGTCTTCGTGTTCCATTATTAA 576 0.5312 MANAKYLTSIFTIIITLLFSFTTAKPPTFHRTISPTSLGLKKEKLSHLHFFFHDIVSGPKPTAVRVVEPRSTNTSSTLFGLMAMIDDPLTVNPEPGSKLVGRAQGIYGSAGQEEMGLLMIMNLVFTEGKYNGSTLSLLGRNAVLSTVREMPIVGGSGAFRFARGYAQAKTHTFDFKTGDAVVEYNVFVFHY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03268 191 Pfam Dirigent-like protein 46 189 IPR004265 -
Spst1g03268 191 Gene3D - 34 185 IPR044859 -
Spst1g03268 191 PANTHER NUCLEOPORIN-RELATED 30 187 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03268 Spst-Chr1 41190014 41190589 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03268 - - gmx:100816095 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03268 1 41190014 41190589 Spst1g03268 1 41190014 41190589 ECH