Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03265 ATGGCCAAATCCACTTTCTTCGTTTCTCTTAACCTCTGTTTCCTCTTCTCTGTGGTCACCGCCACATACTATCAAAGTCTAACACCAACACTGATGGGTTTCCGCGAGGACAAGTTCACCCACCTTCACTTCTTCTTCCACGACGTTGTCACGGGCCCCAACCCTAGCATGGTCATTGTGGCCGAGCCCAACGGAAAAGCCAAGGACGCTCTTCCCTTCGGAACCGTTGTGGCCATGGACGACCCGCTCACCGCCGGACCCGAACCCGACTCCAAGCTGGTGGGGAAGGCGCAGGGGATTTACACTTCTATTTCGCAGGCGGAGATGGGGCTGATGATGGTGATGACCATGGCCTTCACCGACGGAGAATTCAACGGCAGCACCATCAGCGTCTTGGCCAGAAACATGATCATGAGCGAGCCTGTGAGGGAAATGGCCATTGTTGGTGGCACAGGGGCTTTTCGCTTCGCACGTGGCTACGCTCAGGCCAAGTTTCACTCGGTCGATTTCTCCAAAGGCGATGCCATCGTTGAATACGACGTCTTCGTCAACCATTATTGA 561 0.5455 MAKSTFFVSLNLCFLFSVVTATYYQSLTPTLMGFREDKFTHLHFFFHDVVTGPNPSMVIVAEPNGKAKDALPFGTVVAMDDPLTAGPEPDSKLVGKAQGIYTSISQAEMGLMMVMTMAFTDGEFNGSTISVLARNMIMSEPVREMAIVGGTGAFRFARGYAQAKFHSVDFSKGDAIVEYDVFVNHY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03265 186 PANTHER NUCLEOPORIN-RELATED 21 182 IPR004265 -
Spst1g03265 186 Gene3D - 32 173 IPR044859 -
Spst1g03265 186 Pfam Dirigent-like protein 40 183 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03265 Spst-Chr1 41129471 41130031 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03265 - K25075 gmx:100817686 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03265 1 41129471 41130031 Spst1g03265 1 41129471 41130031 ECH