Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03234 ATGGTGCAGAGTCTCTGTTTGATGGCTTCTCATCGTTACCCCCCTGGTCTTGTCTTACACTCACAATTTTTACCCGGTACAAACCTCAAGGGCTACCAAACATCCTTTCCTTCTCCCGTAGCAAAAGTAGACCTGATCAGATATCAGTCTCCTCCTCTTAAGCAAAGCCCATGTGAGGAGTCCAGGAAATACCCAAATGAATGGTTTGATTACAATGAGTTGACTAATGTTGATTTCTCAGTTCAAAGTCCCGTGCTTATTGATGAACAAGCAAACTGCTCAAATGCAGTTCTCTTTGGCTTTGGAATTGTTGAACAATGCACTAAGCGTATTGAAATTACAAATTTACTAATGTCTGAGACTGCTGAAGCAGGGATAGATGGAGCAAATTTGTCTTTGTTATCGGACTTGATGAAATTGCAGGTTTCAGGCATTGATGAATCTCAGCAACCATTGTCATCTCTTATATACCCAACTAACAAATTCATCATTCAGAAGAAGCCTTTACTTCATTTTGTTCAAGATTCAGCCCTTTCTTCAAAGATCATGGTTCATCCAGATGGTCAAATCACATTCATGGGTAGTCCAATTGAGTTGAAAGACCTTCTCTCTGTAGTTGCGGAGTCATACTTATCAAAATGCTCGGCAAAGAGTGAAAAGAAAACTATGCTTGTTCCACACTTCAGTTGGGTGAATATCAATGAATTAGAGAGAAGTCATTCCTCCACATTGAAGAATCAATCCACCTTAACTGCTCCCTTAAAAAGCCCAGAGAAACTCAAACTCAAGCCATCACCAAGAAAGAACAAGAAAGGAGGCAGGGACAGGGATCTCTACAAGAACTATTCTCATGCATGTGAGACCCTTCTGTCCCTGATGGTTGACAAGAAGCAGCGTGGCAAGACGGCAATTCTCTCACTGAAGAAATCCGGCCCTGAGCTTCCTGAGCTCCTGACACAATTTTCTGCCGGCATAGCTGGAACCGGCATTGCGGTTCTGCTATCTGTAATGTGTAACATAGCTTGTGGAAGGGCTACCTTCTGTGGTTCAAGCTTGTTCAACACTGGGTTTGGGTTGGGGTTGGTTTGGCTTTCTGGGGCAGTAAACAAGCTTAGGGCTACAATTTTGAGCATCAGCAAAAACGCAGGAAAGTTGGGTTTGAAAGAAGAGAAAATGATGCAGAAGCTGGATAAGAGCATAAGAGATATTTACTATACTGCTGCAGCATTGCTAGCAGTGGTAGTGCTGAGACTTGCTTGA 1260 0.427 MVQSLCLMASHRYPPGLVLHSQFLPGTNLKGYQTSFPSPVAKVDLIRYQSPPLKQSPCEESRKYPNEWFDYNELTNVDFSVQSPVLIDEQANCSNAVLFGFGIVEQCTKRIEITNLLMSETAEAGIDGANLSLLSDLMKLQVSGIDESQQPLSSLIYPTNKFIIQKKPLLHFVQDSALSSKIMVHPDGQITFMGSPIELKDLLSVVAESYLSKCSAKSEKKTMLVPHFSWVNINELERSHSSTLKNQSTLTAPLKSPEKLKLKPSPRKNKKGGRDRDLYKNYSHACETLLSLMVDKKQRGKTAILSLKKSGPELPELLTQFSAGIAGTGIAVLLSVMCNIACGRATFCGSSLFNTGFGLGLVWLSGAVNKLRATILSISKNAGKLGLKEEKMMQKLDKSIRDIYYTAAALLAVVVLRLA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03234 419 PANTHER OS05G0143300 PROTEIN 3 419 - -
Spst1g03234 419 MobiDBLite consensus disorder prediction 242 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03234 Spst-Chr1 40872994 40882007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03234 - - gmx:100777424 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03234 1 40872994 40882007 Spst1g03234 1 40872994 40882007 ECH
Spst1g03234 1 40872994 40882007 Spst7g01184 7 36381317 36385631 PCT