Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03230 ATGTGGTTTTTTGCGGGGCTGACCCCTCAGATTCCCGGAACAGTGGTGCTAGTGAGGAATGTTCCCCCAGATCCAGATGAATCAGTCTCTGAGCACATCGAACATTTTTTTTATGTCAACCATCCTGATCACTATCTGATGCATCAGGTTGTTTATGATGCGAATAAACTGGCATCAGTTGTTGCACAGAAGAAGAAACTAATAAACTGGTATATTTATTACCAAAACAAATTCGAAAGAGATCCTTCCAAGAGGCCAATTACTCGGACAGGTTTCATGGGTTTGTTGGGGAATAAAGTTGATGCTATTGATCATTATACTGACATAATTGACAAACTGAGCAAACAAGAAGCGGAAGAAAGAGAAAATGTTATAGAAAATCCGAATGCTGTTATTCCTGCAGCTTTTGTTTCATTCAAAACACGATGGGGGGCTGCTGTGTGTGCTCAAACTCAACAAACCAGTGATCCCACCATTTGGCTCACAGAATGGGCTCCCGAGCCTCGGGATGTCTTTTGGGAAAATCTTGCCATTCCATATTTTGACCTCAACATGAGAAGATTGCTCATGACCGTTGCTTTATTTTTCCTAACATTTTTCTTTATGATACCGATAGCATTGGTTCAATCTCTTGCCAACATTGAGTCAATCATGAAGGTCTTTCCTTTCTTGAAGTCAATAATTGAAAAGCCATCCATCAAGTCTCTCATTCAAGGGTTTCTTCCAGGGATAGCATTGAAGATATTTCTTGCGGTGCTTCCAAAAATTCTCATGGCGATGTCCAAAGTGGAAGGTTTTACCTCCCTTTCAGCTTTGGATAGGAGGTCAGCTTCCAAATATTACTTTTTTATCCTCGTCAATGTATTCCTTGGGAGTATAGTAACAGGAACAGCATTTCAGCAACTTCAGCAGTTTCTTAATCAGCCCTCTACAGAGTTCACAAAAACTGTTGGCAGTACAATCCCCATGAAGGCCACATTCTTCATCACATACATAATGGTCGATGGTTGGGCTGGAATTGCTGCTGAGATTCTCAGGTTAACTCCGTTAATTATGTTCCACCTGAAAAACGCGTTCTTGGTGAAGACGGATCAAGACAGAGAGATGGCTATGGATCCCGGAAGCTTGGAATTTGCTACATCTGAACCTCGCATTCAGTTTTATTTCGTGCTGGGGCATGTGTATGCCCCGGTCACACCTTTTCTTCTCCCCTTCGTTGTAGTCTTCTTTGGTTTTGCCTACTTGATCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATACGAGAGTGGAGGATCGTTTTGGCCAGATGTCCATGGTCGAGTAGTTTTTGGCTTGATTATGTCTCAAGTTCTTCTCATGGGATTGTTAAGTACAAGAGGTACAGAAAAGTCGACGCTAGTACTTGCTGTACAACCCATCTTGACATTCTGGTTCCACAGATATTGTAAAGGTCTCTTCGAATCTGCGTTTGTAAAATTTCCACTACAGGAAGCCATGGTGAAGGATACACTTGAACGAGCTGTTGAGCCAAACCTAAACCTGAGAATTTACCTTCAGAATGCTTACATACACCCAGTTTTCAAGGACGACGATTTTGACAAACCAGCAGCCATTGATGATGAAGAAGACAATCCACTAATTCAGACAACTAGAGCTTCTCGTCCGAGTAGCAAACCTGAAAGTGAAACCGGCGCAACTACTGTATCTCCTTCCTCGGATTCAACTATGGCCAGTTTCGTGTCACGCTTCTCATTCTCACTGATTCCCTTCAATCAACACAAATTCGGAGCCAAATGCTTTTGTTTTCACAAACCCTTTATCCAAAGGAAACATCACCAACTTGGATTGCAAAACCTTGTTATCCCCTTTTACCAAAACCCCACTTCGAAATTGTGTGCCACGTCACGGTTGTCCATTGAGGAAACGGAGCAGCAAGTCGGAACCTTGACCCGAGCCGAAGAACTAAAAGGGGCGTTGGCGTATTTGTTTAGGACTGAAACTGGTGGCGGTTCGGTGAAAGTTTATGTCACTAACAGGAAAGATAGGTATTTTGTTTACATTGAGATTTCTTCGTTGGATGTGAATGGTTGTGGTGACAGTGAAACGTTGGTGTTGTGTTGGGGTGTATATAGAGGTGATTCATCGTGTTTTGTGGATCTGGATTCGAATGGTTTGAGTGGAAATGCGGCGAAGGGGATGCATGTTACTCCCTTGGTGCAAACTTCTGGTGGCAAGATTGGAGTTGAGTTGGAATTTGATGCCAAACATGTTCCTTTGTACTTGTCATTTTTCTTGATGTCATCTTTGGAAGCAGGGTTGGAGATTAGAAGCCATAGGAGAACGAATTTTTGCGTGCCGGTTGGGTTGCTTCCGGGCTACCCGGGTCCTTTGGGGTTCTCTTATTCTCCTGATGGGTCTGTGAATTTTGCTATTTTTTCGAGACATGCTGAGAGTGTGGTTTTGTGCTTGTATGATGACAAGGGTGGGGAGAAGCCTGCTTTGGAGCTTGATTTGGATCCCTATGTGAATAGGTCAGGTGATATGTGGCACGTATCGTTTGAGAGTGTCAAGAATTTTGTGAGCTATGGTTATCGCTGCAGACAGGGTGTTCTTATGCAGAAAAGGGGTGATAGTTCTGCTGAGCATGTTGTTTTGGACCCTTATGCTAAGATTGTTGGTAATTCATATCCTGGTGGTCTTGGACTAATGGATAATCTTGGATGGTTGGAGAAGGAACCTGCTTTTGACTGGGGTGGTGATTTTCACCCGGATTTGTCCATGGAGGAACTAGTGGTTTATAGGTTGAATGTCAAGCGCTTTACACAGCATGAGTCAAGCCAACTTCCAAGTGGTTCAGCTGGGACCTTTACTGGTTTGGCTGAGAAGGTTCAGCATTTTAAAGATCTAGCTGTGAATGCTGTTCTGCTGGAGCCGGTTTTCACATTTGATGAGAAAAAAGGACCATATTTTCCTTGCCATTTTTTCTCACTGATGCACATTTATGGACCATCTGGTGACCCTGTATCTACTATTGCCTCTATGAAAGAGATGATTAAAACTATGCATGCCAATGGGATAGAAGTTCTTTTAGAAGTAGTTTTCTCAAATACTGCCGAGGTTGGGGCTCTACAGGGAATTGATGACTCATCCTACTATCTAACAAATGGAGTTGGTGATTTGAAGATACAGAGTGCTTTGAACTGTAACTATCCTATTGTGCAAAATTTGATTCTGGATAGTCTTCGGCATTGGGTGACTGAGTTTCACATTGATGGATTCTGTTTCATAAATGCTTCACACATGCTGAGGGGATTTCATGGGGAGTATTTGTCTAGACCTCCAGTAGTTGAAGCAATTGCTTTTGACCCAGTACTCTCCAAAACTAAAATCATTGCAGATTGTTGGAATCCTCATGACATGGTAGCAAAGGAAATTCGCTTTCCTCATTGGATGAGATGGGCTGAAATGAATACAAATTTTTGTAATGATGTGAGGAAATTTTTAAGGGGTGAAAGTCTTCTTAGCGACCTTGCAACAAGACTTTGTGGGAGTGGAGACATGTTTTCTGGTGGACGAGGCCCTGCATTCTCTTTTAATTACATTGCCAGGAATTTTGGATTTTCTCTTGTGGACATGGTTAGCTTCAGCAGTGATGATGAATTAAGTTGGAATTGTGGAGAAGAAGGACCTACTAACAACATCACCGTCCTTGAAAGACGACTCAAACAAATCCGTAACTTCCTCTTCATCTTGTTTGTGTCATTAGGAGTACCTGTTCTGAACATGGGAGATGAGTGTGCCCAGTCCTCCGGTGGATCTCCCGCATATAATGATATAAAGCCTGTCACCTGGAGTACTTTGACAACAGGCTTTGGGAAACAAACCTCACAATTCATTTTCTTCATGAGTTCACTGAGAAGGAGAAGGAGGGATGTTCTTCAGCGAAGGAGCTTCTTAAAAGAAGAAAACATTGAATGGTATGGAAGTGATGGGTCTCCCCCAAGATGGGAAGACCCATCATGTAAGTTCCTTGCCATGAATTTGAAGGCTGAAGTAGCAGAGTTCCCAGAGAGCTCTATATCTTCTGATATATCTGGGGATCTATTTATTGCTTTCAATGCAGCTAATCATCCAGAAACTATAGTTTTACCCTTGCCTCCAGAAGGGATGTCATGGTACCGTTTAGTTGACACAAGTCTTCCATTTCCCGGCTTTTTCTCAACCAGTGGTCAAATTGTCCCTGAGCAGAGAGCAGGTTTGTTTACTTATAAAATGAAGTCTCACAGCTGCGCTTTGTTTGAGGCATATAATCGTACCATTTAG 4329 0.426 MWFFAGLTPQIPGTVVLVRNVPPDPDESVSEHIEHFFYVNHPDHYLMHQVVYDANKLASVVAQKKKLINWYIYYQNKFERDPSKRPITRTGFMGLLGNKVDAIDHYTDIIDKLSKQEAEERENVIENPNAVIPAAFVSFKTRWGAAVCAQTQQTSDPTIWLTEWAPEPRDVFWENLAIPYFDLNMRRLLMTVALFFLTFFFMIPIALVQSLANIESIMKVFPFLKSIIEKPSIKSLIQGFLPGIALKIFLAVLPKILMAMSKVEGFTSLSALDRRSASKYYFFILVNVFLGSIVTGTAFQQLQQFLNQPSTEFTKTVGSTIPMKATFFITYIMVDGWAGIAAEILRLTPLIMFHLKNAFLVKTDQDREMAMDPGSLEFATSEPRIQFYFVLGHVYAPVTPFLLPFVVVFFGFAYLIFRHQIINVYNQQYESGGSFWPDVHGRVVFGLIMSQVLLMGLLSTRGTEKSTLVLAVQPILTFWFHRYCKGLFESAFVKFPLQEAMVKDTLERAVEPNLNLRIYLQNAYIHPVFKDDDFDKPAAIDDEEDNPLIQTTRASRPSSKPESETGATTVSPSSDSTMASFVSRFSFSLIPFNQHKFGAKCFCFHKPFIQRKHHQLGLQNLVIPFYQNPTSKLCATSRLSIEETEQQVGTLTRAEELKGALAYLFRTETGGGSVKVYVTNRKDRYFVYIEISSLDVNGCGDSETLVLCWGVYRGDSSCFVDLDSNGLSGNAAKGMHVTPLVQTSGGKIGVELEFDAKHVPLYLSFFLMSSLEAGLEIRSHRRTNFCVPVGLLPGYPGPLGFSYSPDGSVNFAIFSRHAESVVLCLYDDKGGEKPALELDLDPYVNRSGDMWHVSFESVKNFVSYGYRCRQGVLMQKRGDSSAEHVVLDPYAKIVGNSYPGGLGLMDNLGWLEKEPAFDWGGDFHPDLSMEELVVYRLNVKRFTQHESSQLPSGSAGTFTGLAEKVQHFKDLAVNAVLLEPVFTFDEKKGPYFPCHFFSLMHIYGPSGDPVSTIASMKEMIKTMHANGIEVLLEVVFSNTAEVGALQGIDDSSYYLTNGVGDLKIQSALNCNYPIVQNLILDSLRHWVTEFHIDGFCFINASHMLRGFHGEYLSRPPVVEAIAFDPVLSKTKIIADCWNPHDMVAKEIRFPHWMRWAEMNTNFCNDVRKFLRGESLLSDLATRLCGSGDMFSGGRGPAFSFNYIARNFGFSLVDMVSFSSDDELSWNCGEEGPTNNITVLERRLKQIRNFLFILFVSLGVPVLNMGDECAQSSGGSPAYNDIKPVTWSTLTTGFGKQTSQFIFFMSSLRRRRRDVLQRRSFLKEENIEWYGSDGSPPRWEDPSCKFLAMNLKAEVAEFPESSISSDISGDLFIAFNAANHPETIVLPLPPEGMSWYRLVDTSLPFPGFFSTSGQIVPEQRAGLFTYKMKSHSCALFEAYNRTI 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03230 1442 MobiDBLite consensus disorder prediction 540 576 - -
Spst1g03230 1442 Pfam Calcium-dependent channel, 7TM region, putative phosphate 186 458 IPR003864 GO:0016020
Spst1g03230 1442 CDD AmyAc_plant_IsoA 928 1307 IPR044096 GO:0019156|GO:0019252
Spst1g03230 1442 Gene3D - 1324 1441 IPR013780 -
Spst1g03230 1442 SUPERFAMILY Glycosyl hydrolase domain 1323 1437 - -
Spst1g03230 1442 Gene3D Immunoglobulins 784 901 IPR013783 -
Spst1g03230 1442 Coils Coil 1304 1324 - -
Spst1g03230 1442 SUPERFAMILY E set domains 793 925 IPR014756 -
Spst1g03230 1442 SMART aamy 936 1311 IPR006047 GO:0005975
Spst1g03230 1442 SUPERFAMILY (Trans)glycosidases 915 1310 IPR017853 -
Spst1g03230 1442 Pfam Alpha amylase, catalytic domain 956 1042 IPR006047 GO:0005975
Spst1g03230 1442 CDD E_set_GDE_Isoamylase_N 798 936 IPR044505 -
Spst1g03230 1442 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 798 891 IPR004193 GO:0004553|GO:0005975
Spst1g03230 1442 Pfam Cytosolic domain of 10TM putative phosphate transporter 16 175 IPR027815 -
Spst1g03230 1442 MobiDBLite consensus disorder prediction 550 576 - -
Spst1g03230 1442 PANTHER GLYCOGEN DEBRANCHING ENZYME 770 1437 - -
Spst1g03230 1442 Gene3D Glycosidases 913 1323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03230 Spst-Chr1 40824910 40842044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03230 593 1441 Glycoside Hydrolase AT1G03310 55.401 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03230 K01214 - gmx:100777953 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03230 1 40824910 40842044 Spst1g03230 1 40824910 40842044 ECH