Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03229 ATGGCGACTATTGCTGATATTAGCCTTTCGGCAGCCATCAATCTGTCGTCTGCATTGATATTCCTGTTAGCGTTTGCAATATTGCGGCTTCAGCCCTTTAATGACCGGGTGTACTTCCCAAAATGGTATCTGAAGGGGATAAGAGGCAGCCCAACAGGTTCCACGTTGGTAAAGAAATTTGTTAACTTGGACTTCGGGACCTACATCAGGTTTCTGAACTGGATGCCTGCAGCATTGCATATGCCAGAACCTGAACTTATTGATCATGCAGGCCTTGACTCAGCAGTGTATATTCGGATATATCTTCTTGGGGTCAAAATATTTGCCCCAATTACGCTGCTTTCTTTTATGGTTTTGGTTCCTGTTAACTGGACTGGGAACACATTGGAAGCAGCCGGAGCTAAGAATTTGACATTTAGCGATATTGACAAGATTTCAATATCAAACATTCCATATGGATCAGATAGGTGA 471 0.431 MATIADISLSAAINLSSALIFLLAFAILRLQPFNDRVYFPKWYLKGIRGSPTGSTLVKKFVNLDFGTYIRFLNWMPAALHMPEPELIDHAGLDSAVYIRIYLLGVKIFAPITLLSFMVLVPVNWTGNTLEAAGAKNLTFSDIDKISISNIPYGSDR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03229 156 Pfam Late exocytosis, associated with Golgi transport 9 156 IPR032880 -
Spst1g03229 156 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 6 155 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03229 Spst-Chr1 40822760 40823398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03229 K21989 - gmx:100776693 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03229 1 40822760 40823398 Spst1g03229 1 40822760 40823398 ECH