Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03225 ATGTTGCATGACCTGAGGCTTGGTATGGGGAAGTTCCGACCAGAGAGGTTTGTGTACGATGCTGAGGATATTCCATTTGGGACACTGTCGTGGTTCCTTTATGCTGGAATTTCTTGCTTGCTTGTTCTCTTCGCGGGGATTATGTCTGGTCTCACTCTTGGATTAATGTCTCTGGGTCTCGTGGACCTTGAGATTCTCCAGCGGAGTGGTTCCTCCACCGAGAAGAAACAAGCTGCTGCTATTTTGCCGGTTGTTCAAAAGCAGCATCAGTTGCTTGTCACCTTGCTTCTTTGTAACGCCTGTGCCATGGAGGCACTTCCTATTTACCTTGACAAAATTTTTCATCCATTTGTAGCAGTACTGTTATCTGTGACATTCGTTCTTGCTTTCGGAGAGGTTATCCCACAAGCTATATGTACAAGATATGGACTCTATGTTGGTTCTAACTTTGTGGGTCTTGTACGTGTCCTGATGATCATTTGCTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACATAGTCATGCATTGTTTAGGAGAGCTCAGCTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGACGAGGCAACAATTATCAGTGGAGCACTAGATCTCACGGAGAAGGTAGGTACTACTAATTTGGAGAAAGGCATCCTGATAGTTCTATCTCTTGCCATCTATCTATACACCTGGAAATGTAAAAGTATACTCTGCCAAAGAGATAATGTATGCCCCTATATCTATGATGTTTTGGCTCTGTATGAAGCTGCAGAAGAAGATTCTATCATGAGCCAATCCTCTACTGCTGAGGAGGCTATGACACCAATTGAATCTACATTTTCCTTGGATGTTGCTTCCAAGTTGGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGCCATAGTCGAGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTTAAAAACCTTCTTACTGTAAGAGCTGAAACAGAGACCCCAGTTAGTGCTGTTTCCATCAGGAAAATTCCTAGGGTTCCAGCAGATATGCCTTTATATGATATCCTCAATGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCCGTAGTCAAGGTTACACAAGAGAGAAATGACCCTTTAAAAACTGGTGACATTGAGAAATCCAAGGATAAAGAAGCCATGAAGAATAGTTCTGAATTAACTATGCCATTGTTAGCCAAGTCTTATGGGACATCAGAAAAAGTTGTCAATATTGACAAACCCTCTTGGCATGCTGCAGACCAACAATTTCAAAAGGATGGCACTGCAACAAATGGGGTTCACCACTCACTTGACAATGTTGACGACGGGGAGCAAGTTATTGGCATCATTACCCTGGAGGACGTGTTTGAAGAACTCCTTCAGGAAGAAATTGTGGACGAGACTGATGTGTATATAGATGTACATAGAAGAATACGTGTGGCGGCTGTAGCAGCTGCTACATCTGTGGCACGGGTTCCTTCTTCCCGAAAGTTGACAGGTCAAAAGCCTGTAGTAACACAGAATCAGTATGATAAGGATGATGGTCATGGTGGCAAAAGAAAATTAGGATATGAAAAATGCCTGTTTCTCTTAGCAGACATATACCAGTTTCTTGGCTTTGGCTGTCTCTTCATTTATTAG 1701 0.4274 MLHDLRLGMGKFRPERFVYDAEDIPFGTLSWFLYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEVIPQAICTRYGLYVGSNFVGLVRVLMIICYPIAYPIGKVLDVLLGHSHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKVGTTNLEKGILIVLSLAIYLYTWKCKSILCQRDNVCPYIYDVLALYEAAEEDSIMSQSSTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRKIPRVPADMPLYDILNEFQKGSSHMAAVVKVTQERNDPLKTGDIEKSKDKEAMKNSSELTMPLLAKSYGTSEKVVNIDKPSWHAADQQFQKDGTATNGVHHSLDNVDDGEQVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSSRKLTGQKPVVTQNQYDKDDGHGGKRKLGYEKCLFLLADIYQFLGFGCLFIY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03225 566 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Spst1g03225 566 Pfam Cyclin M transmembrane N-terminal domain 37 208 IPR002550 -
Spst1g03225 566 CDD CBS_pair_CorC_HlyC_assoc 282 388 IPR044751 -
Spst1g03225 566 SUPERFAMILY CBS-domain pair 280 481 IPR046342 -
Spst1g03225 566 Gene3D - 274 399 IPR046342 -
Spst1g03225 566 PANTHER METAL TRANSPORTER CNNM 17 521 IPR045095 GO:0010960
Spst1g03225 566 Gene3D - 402 487 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03225 Spst-Chr1 40772897 40778581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03225 K16302 - thj:104801222 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03225 1 40772897 40778581 Spst1g03225 1 40772897 40778581 ECH