Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03219 ATGGGCATTCCCACAAAATTTGCAACAATTTCTATGGTTTTGTTGTGGCTGTGGAGTGTTGCTGATGGTGTTCCCAACACGAGCATCATCAATGTTCTCTGCAACAGTGGGTTATACACCTCAGGGGACCCTTTTGGATTTAGTTTAAACTATGTTTTGGGGGACTTGGAGAAAGAAACAGCAGCACAGAAGAATTATGACTACCACAACATTTCACCATATCCTAATGCCTATGTCTATGGCCATGCTACTTGTAACCTTAATCTCACTTCCTCTGATTGCAAAACATGTCTTGGTGCTGCTAAAATGGCCTTGTTTAGCACATGCCAGACACCACGGATAGGGGCTCGTTCGGTGCTCCTTGATTGTACAATCAGGTACGAGCAATACCCATTTGACGATTAG 405 0.437 MGIPTKFATISMVLLWLWSVADGVPNTSIINVLCNSGLYTSGDPFGFSLNYVLGDLEKETAAQKNYDYHNISPYPNAYVYGHATCNLNLTSSDCKTCLGAAKMALFSTCQTPRIGARSVLLDCTIRYEQYPFDD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03219 134 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 132 - -
Spst1g03219 134 FunFam Antifungal protein ginkbilobin-2 26 132 - -
Spst1g03219 134 Gene3D - 26 132 IPR038408 -
Spst1g03219 134 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Spst1g03219 134 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03219 Spst-Chr1 40704446 40704850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03219 - - gmx:102664018 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03219 1 40704446 40704850 Spst1g03219 1 40704446 40704850 ECH
Spst1g03219 1 40704446 40704850 Spst7g01211 7 39134399 39134800 PCT