Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03215 ATGGAAGCAACCAGATTCTCCCCTAATCACTTCCACCCACACTCCTTCCAAACGAAACCCAATGCACTCAGAGAAAGAAGATACGTAAAATGCATCAACGGAATTGGTACTAGGGTTTCGCTTTTCACGTTTCCCGCATTCAGCACAAGGATTTATCCTTCTCATTACCGGTCTCTTTCTGTTAACTTCTCCGACCGGCTCCGAAGTGATTATGCGCGCGTCGAGGCTCCGAAGTATGAGCTTCCGAAGGAGGAGGTTGTTCCTGCGACTCACGGAGGGGAAGCGGCTGTTGCGTTGGATCCGGGGGCTGATGACTCGGTAACCCCGCAATTGAAACCTGTAATGTTCAGAAACAGGTTTCTGAACTTTGTGCGGTTGGGTTCTGTGATTAACGGTGCGGCTGAATCGTTTTTCAAGAGCGAGATTAGGAGGAGGTTGTTCGTGACGGCGGTGCTGATTGTGATTAGTCGCGTTGGTTATTTTATTCCTCTTCCGGGGTTTGACAGAAGGTTGATACCGGAAGATTATTTGAGCTTTGTGTCAGGATCATCTGTTGATGAACTTGGTGACTTCTCTGCTGAGCTCAAGTTATCTATTTTCCAGCTTGGAATCAGTCCTCAGATAATAGCGTCCATTATTATGCAGGTACTCTGTCATGTTGTCCCTTCGCTAGTAAAACTACGAAAAGAAGGGCTGGATGGGCATGAGAAGATTAAGAGTTATATATGGTGGATGTCATTTGGCTTTGCAATTTTGGAAGCTTTAATAGTTGCATGCTACTCACTTCCATATTCAATTTATGCTTCTAGTTATAGGGTCAAGCATGTAATGGTGACATCGCTTTTATTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACTATATCAGAATCTGGATTTGGTCAAGGCTCGTCTCTAATCATATGCGTGGGCATACTTACGGGGTATATGGAAACATTATACAAAATGCTTACTCAGCTTTCAGTGAGCGCTGTGAGCTGGTGGCCATATGTGCTTGCAGTATTGGGTATCTTCACTACAGTCACTATGTGGGCAGTTGTAGTAACGGAAGGTTGCAGGAAAGTAAAGCTGCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGAGAGCAATCACCTATTACTGAAGTGGAGCCCTATATCCCTTTCAATATTAATCCAGCAGGGATGCAACCTATTCTTACCACCTCTTACCTCTTGGCACTTCCAAGCATTCTTGCAAGTCTGCTGAGGTCACCTTTTTGGGAGCATGTCAAGGAAATATTGAACCCTGAAACTTCTGTTGGTGCTGAGCCATGGGTTTACTATTCCATATATGCTTTTTTTGTCTTCCTGTTCAATATATTTGATATTGCTAACATGCCAAAGGAAATCGCTGATTATTTAAATAAGATGGGTGCGAGAATACCAAACATAAAGCCTGGGAAGGCTACCATAGAGTACCTCACCAAGGTCCAGGCATCCACACGATTTTGGGGCGGCCTACTGTTAAGTGTTCTGGCCACTACATCAAGTGTTCTCGACCACTATTTGCGGCGTATCAATGCTGGGTTTGCTATTGGTTTTACATCAGTTCTAATTATTGTTGGTTCCATTATTGAACTCAGAAGATCATATCAAGCATATAATGTGATGCCAAGCTTAAGCAATGCCTTGAGACGATATGGTGTATAA 1701 0.4356 MEATRFSPNHFHPHSFQTKPNALRERRYVKCINGIGTRVSLFTFPAFSTRIYPSHYRSLSVNFSDRLRSDYARVEAPKYELPKEEVVPATHGGEAAVALDPGADDSVTPQLKPVMFRNRFLNFVRLGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPEDYLSFVSGSSVDELGDFSAELKLSIFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSFGFAILEALIVACYSLPYSIYASSYRVKHVMVTSLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLYKMLTQLSVSAVSWWPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPILTTSYLLALPSILASLLRSPFWEHVKEILNPETSVGAEPWVYYSIYAFFVFLFNIFDIANMPKEIADYLNKMGARIPNIKPGKATIEYLTKVQASTRFWGGLLLSVLATTSSVLDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03215 566 FunFam Preprotein translocase subunit SCY2, chloroplastic 130 556 - -
Spst1g03215 566 Gene3D SecY subunit domain 130 556 IPR023201 -
Spst1g03215 566 SUPERFAMILY Preprotein translocase SecY subunit 128 551 IPR023201 -
Spst1g03215 566 Pfam SecY 198 544 IPR002208 GO:0015031|GO:0016020
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 197 217 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 397 416 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 299 322 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 146 164 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 442 464 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 273 298 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 238 261 - -
Spst1g03215 566 PRINTS Preprotein translocase SecY subunit signature 530 548 - -
Spst1g03215 566 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 136 554 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03215 57 566 Miscellaneous Gene Families AT2G31530 75.681 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03215 - - gmx:100803256 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03215 1 40664152 40671222 Spst1g03215 1 40664152 40671222 ECH