Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03201 ATGGACCGAAACAGAGGAAGATCATCCTCATCCATGTCCGCAAACGCCTTCCCCAGACGCCGTCACCCTACTATCTCCCTCCGAGGCGCTTCACAGGAGGTGCAGGAGATGAGGTCGAAGGATAATAATAATAATAAGAGGGAATGGACGAAGAAGAGGAGAGGGAGTAACTCTCACAGCACCGAGGAAGAGAGTGTGGGAAATGAACCGGAGGCGCGGTTGCATTCTAACAATACTGCGTCGTCCGCATCTGATCATAACCACCAAGGACGGAACGTGATCGACCAAGTGATGATCGGTGCTACAGTGCCCAGGAGGACTCGTTCAGCTTCTGTGAAAAGACCGCATCACAGTTGGGTTGAGGAGCAGAGTGCTGAAGCTGCGTCGCCTTCGTCTTCCAATGTTTCTCTTCCCAAGAAGATGAAAGCGGTTGGACCGTCTTCGTCGAATCAGGAAGACATCGAGATTGAGATAGCTGAGCTTCTGTACGGTTTACGAACTTCTCAGAACCATGATTATTCTTCTTCGCAGAAGGTTGAAGCAAGTGATTCGCCTCCACTTTCGTCTTACCCTTCCGTTGACGTTGGGAAAAAGAAAGTGGGAGATTACAGATCTTCTTTCACTCTACCTCCGAACAAGTCAATTGCCGAGTCAGTCGGAATTGACAGCGAGCAACATGAGAAAACGGAGAAACCTTCGTCCGAATCGCCTAGGATGTCTTGTGGTCATGGAATTGGGACATCCCAGGGTCCAAAACAGGACACCGAGGAAGATAGTTTGAATTCAGGTTGTGGATTTGGGGAGACTGTAGATGGAAAATCAGAATCCAAGTTGGATGTTCATAAACAGGATTGTGCTTCTAACGTAGGGATTCCGGAGGGCAACGACCAGCACAAGTTTGAGATTGATCTGATGGCTCCTCCACCTGCGGCCTTATCGCCAGAATGGGATAACTTGTCAAGGGGTGAAGACAGTAACAAGGTTGAAGACAAGGTAGAAAGTTTCAATAAGAAGGAGAAAGCACTGGAAAAAACTGAAGAGCTGAAAATGAAAGTTGATTTGGAGAAGCCAGATAAACATAATAACCTAGCAACAGAACATGAATTAGGTGAGCTGGGTAGGAATAAGGAACAACCAACTACAACATCAACAAATCCCAAACTTGAGAAATCTGCTCAATGTAGTTCAATGTCTTTGTCAGTGGCTGTATCCGAAAGGCCAAGCAGTTTCTCTCCCCTTGGATACATGCCGCTCATGGGGACAGTTGTGAAGACTGATAAAACAACAGGATTATTGACAGCTCCTCAACATGAGCACTTTGTTTTGTCTCAACCTTGGCCACAGAGATGTGCAACCCATGGTTACATTGCTCGGAACATCTTCATGCACCAACAGTGGACAAAGATGAATACCCTTTTGCCGTCTGCAGTTGGCTGTGGTTCTATGTGTGACACAAAGCTCAACAGAGTCCAATCTGCTGAAAGTGTCGTTGTTGGGAAGCAGTTTCATAAACAGTCACCACCAGGTGTCAGCCAAAATGCAGCCCCGGATAAGGGTTGGTCTATCACAAGTGATTTTAGTCTTGCTGCATTTAAAAGTTCTGGTCCTGCCAACCCAATGGATATGACGCAAATGAAGCAGCTTATGCTTCAGCAAGGTCCACATCCAGGGTCTTCTGCTAATATAGTTCATGGTCCTGCTTTCCCAATTCCTCCTAGCCAGCATCAAGCATCTGTATTAACAAATACTAGTCAAGTTGGTGGTGTGAACAACAGTAGCAGTTCTTCCTTGTCTAATAAATTCCACGGTTCCGCAGCTGGATCTCTTGGTGCTTCAACACTGCCAGCAGTTGCTGCTGCAATGAGCTTTAGCTACCCAAATTTGGCAGCCAATGATGCTCCATATATGACAATAGTTCCGAATAGTGGGTATCCCTTCCCCTTTGCAAACCCCCTTGGACCATCCGCAGCTATCAGAAATGCAAGCCCTGCACAGTCAACACCTATTCTCAATGGGCCGTTGTACTCTTCTCAGATCTTCCACCCACTTCAGTATCCACAACAACATCCTCACTCTCAACCACTGGTTCAACCTAGTTATCTTAATGCAAGCACATCTAGTGTTTCATCATCATCATCTCATAAGCAGTCACAAGGAATGCAAGGTAACAACAACCATATTTTGTCCTCCACAACTATGCAACTTCAGCAGTCACAAAAACAGCACACCTCACAGTCTCATCTTCGCAAGCATGAGACTGGGATGGCTGGGGAGAATGCTCCATCTGCTGCCATTGTAACAGCTTACTCCCAAAAGAATGTATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGAGCCTTTCTTTAACGCCATCGACAACATCAGATAGTGTTGGTGGCTACAGTGGGAATTTTGGCGACAAGCAGCAACAGACTTTGAAGGGGGGACTTGATCATATTCCATCTCAACCATATGCAATCTCATTTTCTGCATATAACGGGGCAAGTGCTCCTTCAAATCTTAACTTCTCAACCATGGCACAAAACCCAGTGATATTTCAGAGCCTGTCTGATATTGCATGGCAAGGATATCATGCTGCAAGTACATCTCATGCAACTCAACAAAAGATGTATCCCATTATAGAAGGGAAGAGTGGAGATAGTTCTTCTCACCAAGAAGATGAAAAGAAAGCCACTTCTGGGAAGCCATCAACCAACGGACCAACAACCCTTGTTTTTGATAATTCATCAAAGAATCATAATTTAGTTTCATCTCCCATGAATGGAAACTGGCCTAGTCGTTCCATTACTTCAACTGGAACAACCACAGGTTTGCCACTTTCTAGTAATCCTGCAAAGTCTCAACAGCCATCACAGCTGCTTCATCTTCCGCAGCAGCATGGCTTGTTACAGCAGCAACCTGCTGTGGCTACCCGATATAAAGCCCCATCAACAAATGCTACAATTGGTGCAAAATTTTTCACTCCCCTGGCTTATTCACAAACTCAAACTCAAACTCAGAGCAAAAGTTCGATTCAAGGCACTCAGTCAAAAATGTTGGTAACAGCCCTTGATTCTCAGGTTCATAACCCGTGTATCGTAACTTCTACCCCAACTCTCCAAAGTTTTTCTCAGGATCAAGGAAGAGTTTTGCAGGGTCATACCCAAATATCTTATGGGGGAAATTACATATCGTCCTTACCACTCCAAGGGCAACAGCTATTCAATAACAACCAGTCTCTTAGTACAACAGTTGCAGGAATTCCACCTACTGGAGCCAACCTGAAGACAAATTCCCAGGGAAGCAAGGTTAGCTCATCAGTGAACTCTTCGCAGATGCAACCAACTGAGAATTCTTCCACTGCGAATGGCCAAAAATCTTCCCCAGTTTGTGGTAGAAATGTCCCGTCGATCTTGAGCTCGTGCCCCAGCCACCTATCTGAGCTGAAGTATTAG 3459 0.4562 MDRNRGRSSSSMSANAFPRRRHPTISLRGASQEVQEMRSKDNNNNKREWTKKRRGSNSHSTEEESVGNEPEARLHSNNTASSASDHNHQGRNVIDQVMIGATVPRRTRSASVKRPHHSWVEEQSAEAASPSSSNVSLPKKMKAVGPSSSNQEDIEIEIAELLYGLRTSQNHDYSSSQKVEASDSPPLSSYPSVDVGKKKVGDYRSSFTLPPNKSIAESVGIDSEQHEKTEKPSSESPRMSCGHGIGTSQGPKQDTEEDSLNSGCGFGETVDGKSESKLDVHKQDCASNVGIPEGNDQHKFEIDLMAPPPAALSPEWDNLSRGEDSNKVEDKVESFNKKEKALEKTEELKMKVDLEKPDKHNNLATEHELGELGRNKEQPTTTSTNPKLEKSAQCSSMSLSVAVSERPSSFSPLGYMPLMGTVVKTDKTTGLLTAPQHEHFVLSQPWPQRCATHGYIARNIFMHQQWTKMNTLLPSAVGCGSMCDTKLNRVQSAESVVVGKQFHKQSPPGVSQNAAPDKGWSITSDFSLAAFKSSGPANPMDMTQMKQLMLQQGPHPGSSANIVHGPAFPIPPSQHQASVLTNTSQVGGVNNSSSSSLSNKFHGSAAGSLGASTLPAVAAAMSFSYPNLAANDAPYMTIVPNSGYPFPFANPLGPSAAIRNASPAQSTPILNGPLYSSQIFHPLQYPQQHPHSQPLVQPSYLNASTSSVSSSSSHKQSQGMQGNNNHILSSTTMQLQQSQKQHTSQSHLRKHETGMAGENAPSAAIVTAYSQKNVFGQNFPIPVQPLSLSLTPSTTSDSVGGYSGNFGDKQQQTLKGGLDHIPSQPYAISFSAYNGASAPSNLNFSTMAQNPVIFQSLSDIAWQGYHAASTSHATQQKMYPIIEGKSGDSSSHQEDEKKATSGKPSTNGPTTLVFDNSSKNHNLVSSPMNGNWPSRSITSTGTTTGLPLSSNPAKSQQPSQLLHLPQQHGLLQQQPAVATRYKAPSTNATIGAKFFTPLAYSQTQTQTQSKSSIQGTQSKMLVTALDSQVHNPCIVTSTPTLQSFSQDQGRVLQGHTQISYGGNYISSLPLQGQQLFNNNQSLSTTVAGIPPTGANLKTNSQGSKVSSSVNSSQMQPTENSSTANGQKSSPVCGRNVPSILSSCPSHLSELKY 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03201 1152 PANTHER PROTEIN TIME FOR COFFEE 1 214 IPR039317 GO:0042752
Spst1g03201 1152 MobiDBLite consensus disorder prediction 71 91 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 1 91 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 173 278 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 124 152 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 883 957 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 173 189 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 375 393 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 39 70 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 105 152 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 353 374 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 220 234 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 1094 1135 - -
Spst1g03201 1152 Coils Coil 325 345 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 240 262 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 320 335 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 703 758 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 353 393 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 703 743 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 902 957 - -
Spst1g03201 1152 MobiDBLite consensus disorder prediction 311 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03201 Spst-Chr1 40513169 40517698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03201 - - vra:106757719 1673.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03201 1 40513169 40517698 Spst1g03201 1 40513169 40517698 ECH
Spst1g03201 1 40513169 40517698 Spst7g01234 7 40325493 40330397 PCT