Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03199 ATGGAGGAATTTATTGATAAATATGATCAAATCCATCACGTAAACCATCATCAATTATGGAAAAGTGGTCAAATTAAGAATGATACTCGCTACGATACCAACAAGTTCTATGTATTTAGAAATGTATCGAAAATGGAAAGAGGAGTTGAATATTTGAAGCATAGAAAGTCATCAAATTTGGATGAACATCTCAAGTTGGAGGTTAATCCTAATCCTAAAAGTATGTATGAGTGGACAAATTTAGATGAACTTTCTCAAACTGAAAACATTCCAAAGCGCCGGTGCATCATGGCTTCTCAATCGTCCTTCACTCACAGTCACATGCTTTCTTCATCACGTGCCAGACCTGCAGCAAAATCCTTTGACCCTGCTAGTTTTTACCTTCGATCGTCATATAATATTTTCACGGTGAAGCCTGATGCATGGTTCCTAATAGGCCACCCAACTATTTATGCAGAAGTCAACCTTTCTAGTTATGATGTGAAGTTTGTCAAAGTAGAAATTGTTGCCGAAGTGTTTCAGGATAATATCTTGAAGGATGATAATGTAGACGAGGAAGGTCTTAACCAGATTTTGGTAACAAAGGAGATACGGAAGAAAATAAATATCATAAAATTAATATTGGATTCGAAGCAAGATGGAGAAATAACAGTATCAGCATATGACACGGCATGGGTTGCTCTTGTGAAAAAGGTTGGGGACAGAAATTCTCCTCAATTCCCTTCCTGTCTTGAATGGATTGCAAATAATCAGCTTCATGATGGTTCCTGGGGAGACTCTCAATTATTCATTGCCCATGATCGTATTCTTAACACGTTAGCTTGTGTGATTGCATTAAGATCATGGAACATGCACCCTGAAAAGTGTGAGAAGGGAATGAAATTTTTTAAAGAGAATCTGTACAAGCTTCAGGATGAAAATCCAGAACATATGCCAATCGGGTTTGAAGTTACTTTCCCTTCTCTTCTGGATTTAGCAAGAAGTTTGGATGTTGAAGTGCCAGATGACTCCACTATCTTGAAAAACATCCTTGCGATGAGAGACGTGAAACTGAAGAAAATTCCAAGAGAGATTCTGCACAAAGTGCCTACAACTCTGCTCCACAGTTTGGAGGGAATGCAAAATTTAGACTGGAAACAGCTACTGAAGTTGCAGTGCCAAGACGGGTCATTCTTATTCTCTCCATCTTCTACAGCTTATGCTCTCATACAAACCAAGGATGAAAGTGCTCACAAATACCTGGATAAAACAGTTCGGAGATTCAATGGGGGAGTTCCCAATGTCTACCCCGTGGATTTGTTTGAACACATATGGATGTTCGATAGACTAGACCGTCTTGGAATTTCAAGATATTTTCAGCCGGAGATCAAAGAATGCGTGACATATGTTTCAAGATATTGGACTGAGAAGGGTATTTGCTGGGCAAGGAATTCAGAGATTCAAGATATAGATGACACAGCAATGGGATTTAGACTACTCAGGTTGCATGGGCACCAAGTTTCAGCCAATGTGTTTGATCATTTTAAGAAAAATGGCGAGTTCTTCTGCATTTCTGGGCAATCGAACCAAGCTGTGACAGGGATGTTCAATCTCTATCGAGCATCTCAAGTGCGATTTCAAGGAGAGAAGATTCTTGAGGATGCCAAAAACTTCTCAGCCAAATTTTTAACTGAAAAACGTGAAGCAAATGAGCTCCTAGATAAATGGATCATAACCAAAGATTTACCTGGCGAGGTGAGTTATGCTCTGGACGTGCCCTGGTATGCTAGCTTGGCAAGATTGGAGACAAGATTTTATCTTGAACAATATGGTGGTAGCAGTGATGTTTGGATTGGCAAGACCCTTTACAGAATGCCCATTGTGAACAATGATGTTTATCTTGAGCTTGCAAAATTGGACTACAGCAACTGTCAAGCAGTGCATTGTGCAGAATGGGAAAGAATCAAAAGGTGGTACTGGGAAGCAGGACTAGAGAGATTTGGTTTGAGCGAACAAAGTCTCCTATTTGCTTACTTTATAGCAGCAGGCAGCATATTTGAACCTGAGAGGTCTCGAGAGAGACTTGCATGGGCTAAAACTGCAACATTGATCGAGACATTTGGGTCCTACATAAAGGATGAACAAACTAGGAGTGTTTTTGTTGATTTGTTCAACAACAGCATTAAAGGACGAAACTTCTCCAGCAAGCAGTGGAACAAGAACAATAGAGAGGAAGAACTCCTGGAGATTTTGCTGACAAACCTTGATTACCTTGGGATCGAAATGTTTCGGAGTCATGATCGTGAATTTTCCCATTATTTGAATCAAGCAGTGAGTGGAATACATTTCTATGCACTTCTGACAAACATTCAAAAAGCACATGATGGTGGCAGCAACAAGAGAACAATCAGCATGCCTACATCTCAAATAGAATCAGACATGCAAGAACTTGTGCAGTTGGTGCTCCAAAATTCCTCAGATGGGTTGCACACCAATGTGAAGAACTCATTTCTCACAGTGGCCAAGGGCTTCTACTATGGAGCATATTGTGACCCAGAGACCATAAACTCCCATATTGAGAAAGTTCTCTTTGAAAAAGGAAAAAGAATCCAGCGTCAAAAAATTCATCAGGCCATAAATCTCTTGTTGGAGCTAAGAGATTATAATAAGATCTCCTTGGGAGAATCTCTTTTAAATCGCTCGTACATTGATCACTATTTCGAAAACCACTATGCTCCGACCAATGGATTCAAGTTTACTATCCATGAATGGATGATCATGTTGCAACAGCTCCGAGCCTTATAA 2784 0.3991 MEEFIDKYDQIHHVNHHQLWKSGQIKNDTRYDTNKFYVFRNVSKMERGVEYLKHRKSSNLDEHLKLEVNPNPKSMYEWTNLDELSQTENIPKRRCIMASQSSFTHSHMLSSSRARPAAKSFDPASFYLRSSYNIFTVKPDAWFLIGHPTIYAEVNLSSYDVKFVKVEIVAEVFQDNILKDDNVDEEGLNQILVTKEIRKKINIIKLILDSKQDGEITVSAYDTAWVALVKKVGDRNSPQFPSCLEWIANNQLHDGSWGDSQLFIAHDRILNTLACVIALRSWNMHPEKCEKGMKFFKENLYKLQDENPEHMPIGFEVTFPSLLDLARSLDVEVPDDSTILKNILAMRDVKLKKIPREILHKVPTTLLHSLEGMQNLDWKQLLKLQCQDGSFLFSPSSTAYALIQTKDESAHKYLDKTVRRFNGGVPNVYPVDLFEHIWMFDRLDRLGISRYFQPEIKECVTYVSRYWTEKGICWARNSEIQDIDDTAMGFRLLRLHGHQVSANVFDHFKKNGEFFCISGQSNQAVTGMFNLYRASQVRFQGEKILEDAKNFSAKFLTEKREANELLDKWIITKDLPGEVSYALDVPWYASLARLETRFYLEQYGGSSDVWIGKTLYRMPIVNNDVYLELAKLDYSNCQAVHCAEWERIKRWYWEAGLERFGLSEQSLLFAYFIAAGSIFEPERSRERLAWAKTATLIETFGSYIKDEQTRSVFVDLFNNSIKGRNFSSKQWNKNNREEELLEILLTNLDYLGIEMFRSHDREFSHYLNQAVSGIHFYALLTNIQKAHDGGSNKRTISMPTSQIESDMQELVQLVLQNSSDGLHTNVKNSFLTVAKGFYYGAYCDPETINSHIEKVLFEKGKRIQRQKIHQAINLLLELRDYNKISLGESLLNRSYIDHYFENHYAPTNGFKFTIHEWMIMLQQLRAL 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03199 927 Pfam Terpene synthase, N-terminal domain 377 583 IPR001906 GO:0010333|GO:0016829
Spst1g03199 927 FunFam Ent-copalyl diphosphate synthase 220 432 - -
Spst1g03199 927 Gene3D - 220 432 - -
Spst1g03199 927 Gene3D Farnesyl Diphosphate Synthase 637 778 IPR008949 -
Spst1g03199 927 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 388 607 IPR008930 -
Spst1g03199 927 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 193 617 - -
Spst1g03199 927 FunFam Ent-copalyl diphosphate synthase, chloroplastic 410 634 - -
Spst1g03199 927 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 195 771 - -
Spst1g03199 927 Gene3D Farnesyl Diphosphate Synthase 779 865 IPR008949 -
Spst1g03199 927 Gene3D - 204 634 IPR036965 GO:0010333|GO:0016829
Spst1g03199 927 Pfam Terpene synthase family, metal binding domain 627 786 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst1g03199 927 SFLD Terpene Cyclase Like 1 N-term 193 617 - -
Spst1g03199 927 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 220 403 IPR008930 -
Spst1g03199 927 SUPERFAMILY Terpenoid synthases 622 700 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03199 Spst-Chr1 40484606 40504372 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03199 K04120 - gmx:100807519 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03199 1 40484606 40504372 Spst1g03199 1 40484606 40504372 ECH