Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03198 ATGGCGTCCATGCGCTTCCCTTTCTCGTTTCCTCAGCCCCCTCAACCGCCTCAATTCCCTCGCGCCTTCACCACATTCGCTGCTGTTGCCGCCGTCGCCGGAGCCTCCGCTGCTGTCGTGGCTGTATCCTCCTCCGACCGCCCCTTTCTCCGGAATGCCCTCAATTCCTTATTCTCTTCTGGCCACTCGTTGCCTCTCTGGGGTTCTATCAGTTTGGCCGACAGTGGGGTTTCCGTGCTCGAGTCAAAGACTGGAGCTTCCTTCCCTTCGGTTCTAGCCTCTTCTCACAAACTATGCGGAATTGGGTTGCGGAAAAAAAGCGTCTTGGGATTGAAGAACATTGATGTATACGCTTTTGGTGTTTATGCTGATGATGAGGACATAAAGACTCATCTTTCTGAGAAATATGGGCAGTTCTCTGCGTCTGAATTGCAGGGAAATAAGGAGTTTATTGATGATCTTATGGACAATGATATATCCATGACAGTTAGGCTTCAAATTGTGTATGGGAGATTGAGCATTCGTTCTGTGCGTAGTGCATTTGAAGAGTCTGTAGGAAGTAGGCTGCAGAAATTTGGGGGATCAGACAATAAAGAATTGCTTCAAAGGTTCACTTCACAGTTTAGAGATGAAATCAAAATACCTCGTGGATCTGTAATTCATCTCTCAAGAGAGAAAGGCCATGTTCTTCGCACATCAATTGATGGAGACGAAGTGGGAAGCATTAAGAGTAAACTCCTATGTAAGTCAATTCTAGATTTATATGTTGGTGAAGAAGCATTTGATAAAGACGCCAAAGAAGAAATTGAGCACAATGTGGCTTCTTACCTCTAG 834 0.4592 MASMRFPFSFPQPPQPPQFPRAFTTFAAVAAVAGASAAVVAVSSSDRPFLRNALNSLFSSGHSLPLWGSISLADSGVSVLESKTGASFPSVLASSHKLCGIGLRKKSVLGLKNIDVYAFGVYADDEDIKTHLSEKYGQFSASELQGNKEFIDDLMDNDISMTVRLQIVYGRLSIRSVRSAFEESVGSRLQKFGGSDNKELLQRFTSQFRDEIKIPRGSVIHLSREKGHVLRTSIDGDEVGSIKSKLLCKSILDLYVGEEAFDKDAKEEIEHNVASYL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03198 277 SUPERFAMILY Chalcone isomerase 83 276 IPR036298 GO:0016872
Spst1g03198 277 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 277 IPR044228 -
Spst1g03198 277 Pfam Chalcone isomerase like 96 269 IPR016087 -
Spst1g03198 277 Gene3D - 127 270 IPR016089 -
Spst1g03198 277 Coils Coil 266 277 - -
Spst1g03198 277 Gene3D - 81 255 IPR016088 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03198 - - var:108347943 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03198 1 40480771 40483650 Spst1g03198 1 40480771 40483650 ECH