Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03196 ATGGCTTCTTCCTTCTCCACCACTTGCCACCTTCCCTCTTTCTCTTACAACCATTTCCCTCTTCCATCATCTTCTTCTTATTCTATTCCTCTTCACCACTTCGCCAAATCATCTCTTGGTTCTGTGTCCTCTGAGACTAACGACAAACGAGAGACGAGATGCAGAGCCATATCCAAACCACAGACACAAGAATATTCAGACGTATTTCAGGGTAGTCTAGCGATATTAAAGTTGCGTGAGATTAATGTGGAAGATGACATAGAAGAGAAGCAAGACAATGAGAAGATTTTGGTGGCAAAAGAGATCAAGAAGCGAGTGGACACTATCAGATCAATATTGGGTTCAATGGAAGATGGAGAGATAACTGTGTCTGCTTACGACACTGCTTGGGTTGCTCTGATAGAAGATGTTCATGGAAATGGAACCCCTCAATTTCCATCAAGTCTAGAATGGATAGCAAATAATCAACTTCCCGATGGATCATGGGGTGATAAGGAATTGTTTTCGGCCCATGATCGGATCATTAACACATTGGCTTGTGTTATTGCATTAAAATCATGGAACATGCACCCTGAAAAGTGTGAGAAAGGAATGACATTTTTCAAGGAGAATCTTCATGAGCTTGAGAATGAGAATGCGGAGCATATGCCAATTGGATTTGAAGTAGCTTTCCCATCCCTTCTTGACATTGCTCGTGGGTTGGACATCGAAGTGCCGGAAAATTCCCCTATCCTGAACAAAATCTTTGCAATGAGAAACGTAAAACTCACAAGTAATGTGAAAAAACTCCCTTTAATGTGTGTGTCATTATTGTGTGGACCTTGGTGTGGGGATAGAATACCAAGAGAGATGATGCATAAAGTACCCACAAGTCTGCTTCATAGCTTGGAAGGGATGTCAGACCTGGACTGGAAATTGCTTCTGAAACTGCAGTCTCAAGACGGTTCCTTCTTGTTTTCTCCGTCCTCCACCGCCTATGCTCTCATGCAAACCAAAGATCAAAATTGCCACAATTACTTGAATCAAATTGTCAAGAGGTTCAATGGGGGAGTTCCAAATGTGTACCCAGTGGATTTGTTCGAACATATTTGGGTGGTTGATAGGCTGGAACGCCTAGGAATATCTCGGTATTTTCAGCAAGAGATCAAAGACTGTTTGAGTTATGTTTCCAGATATTGGACTGAGAAGGGCATTTGTTGGGCAAGAAATTCAAATGTTCAAGACATTGATGACACAGCAATGGGTTTCAGACTGTTAAGATTGCATGGCCACGAAGTTTCAGCTGATGTGTTTAAGCACTTTGAGAGAAAAGGTGAATTCTTCTGTTTTACGGGACAATCAACGCAAGCTGTGACAGGAATGTATAATTTGTTAAGGGCAAGTCAAGTAATGTTTCCCGGAGAGAATATTCTAGAAGATGGGAAGAAATTTGCTGGAAAATTTTTGAGTGAGAAGAGAGAGGCAAATGAGTTGGTTGATAAATGGATCATAATGAAAAACTTGCCAGAAGAGGTGGCATATGCATTGGACGTGCCATGGTATGCAAGTTTGCCGCGAGTGGAGACAAGATTCTACATTGATCAATATGGTGGTGAGAATGACGTGTGGATAGGCAAGACCCTTTATAGGATGCCTTATGTGAACAACAACCATTATCTGGAGCTTGCTAAATTAGATTACAACAATTGTCAGGCACTGCATCTAATGGAGTGGGGGAGAATGCAGAAGTGGTACTCAGAATCTAGATTGGGAGAGTTTGGAATGAACAGAAGAACACTTCTGTTGGCTTATTTTCTAGCAGCAGCAAGCATATTTGAGCCTGAAAAGTCTCATGCAAGGCTAGCTTGGGCCAAAACCACAGTTTTACTTGAGACAATAACATCCTATGTTAGTGATGCAGAAACGAGAGAAGCTTTCGTTAAAAAATTCAGTGACTGCATTAGCATGCAAGACCACTCCATTGGCTGGAGGTTGAACAGGAACAGAACAGGACATGGACTGGTTGAGACTTTGGTTGCCACCATAGATCAAATATCGTGGGATACCCTTGTCTCTCATGGTCATGAAATTGGATATGATATGCATCGCAGTTGGGAAAAGTGGCTTTCAAGTTGGCACAGCGAAGGGGACAAATGGGAAGGACAAGGAGAGCTTTTGGTGCAGATAATAAACCTCTGTGGCGGGCATTGGATTTCGGAGGATCAAATGTTCGATCCTCAATATGAGACTCTCCTGCAACTCACTAACTCACTCTGCCATACACTCTATTCTCATCAAAAGGACAAGGAATTGGACGGCATGATCACCCCAGAAGCTGATTCGAAAATGCAAGAGCTGGTGCAGTTGGTGTTCCAGAAATCTCCCTCTGCCATTGATTTCAATATCAAGAATACTTTCCTCACTGTGGCCAAGAGTTTTTACTATGCAGCTTTCTGTGATTCAAGGACCATCAACTTCCACATTGCCAAAGATGCCACCTTCAGGGATTGTGTATACCTTGGCACCATCAGTAGTGGTCAAAGCAAATCCTTATTGCTTGTTCCAACATCAAAGTTGAATATAGAAACCTTGCAAGCACAACAGTTAAGGTCCTCTTTGGGGTCTTCACTAACAAAGTTGTGTGGTACCCTTGAAACTATGTCTCTCTCACAACCTTATTCTTCGTCCCAAAACTAA 2676 0.4226 MASSFSTTCHLPSFSYNHFPLPSSSSYSIPLHHFAKSSLGSVSSETNDKRETRCRAISKPQTQEYSDVFQGSLAILKLREINVEDDIEEKQDNEKILVAKEIKKRVDTIRSILGSMEDGEITVSAYDTAWVALIEDVHGNGTPQFPSSLEWIANNQLPDGSWGDKELFSAHDRIINTLACVIALKSWNMHPEKCEKGMTFFKENLHELENENAEHMPIGFEVAFPSLLDIARGLDIEVPENSPILNKIFAMRNVKLTSNVKKLPLMCVSLLCGPWCGDRIPREMMHKVPTSLLHSLEGMSDLDWKLLLKLQSQDGSFLFSPSSTAYALMQTKDQNCHNYLNQIVKRFNGGVPNVYPVDLFEHIWVVDRLERLGISRYFQQEIKDCLSYVSRYWTEKGICWARNSNVQDIDDTAMGFRLLRLHGHEVSADVFKHFERKGEFFCFTGQSTQAVTGMYNLLRASQVMFPGENILEDGKKFAGKFLSEKREANELVDKWIIMKNLPEEVAYALDVPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNHYLELAKLDYNNCQALHLMEWGRMQKWYSESRLGEFGMNRRTLLLAYFLAAASIFEPEKSHARLAWAKTTVLLETITSYVSDAETREAFVKKFSDCISMQDHSIGWRLNRNRTGHGLVETLVATIDQISWDTLVSHGHEIGYDMHRSWEKWLSSWHSEGDKWEGQGELLVQIINLCGGHWISEDQMFDPQYETLLQLTNSLCHTLYSHQKDKELDGMITPEADSKMQELVQLVFQKSPSAIDFNIKNTFLTVAKSFYYAAFCDSRTINFHIAKDATFRDCVYLGTISSGQSKSLLLVPTSKLNIETLQAQQLRSSLGSSLTKLCGTLETMSLSQPYSSSQN 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03196 891 Pfam Terpene synthase, N-terminal domain 303 509 IPR001906 GO:0010333|GO:0016829
Spst1g03196 891 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 314 534 IPR008930 -
Spst1g03196 891 FunFam Ent-copalyl diphosphate synthase, chloroplastic 563 830 - -
Spst1g03196 891 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 125 329 IPR008930 -
Spst1g03196 891 Gene3D - 122 344 - -
Spst1g03196 891 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 100 823 - -
Spst1g03196 891 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 97 543 - -
Spst1g03196 891 Gene3D Farnesyl Diphosphate Synthase 563 829 IPR008949 -
Spst1g03196 891 SUPERFAMILY Terpenoid synthases 548 814 IPR008949 -
Spst1g03196 891 Gene3D - 109 560 IPR036965 GO:0010333|GO:0016829
Spst1g03196 891 SFLD Terpene Cyclase Like 1 N-term 97 543 - -
Spst1g03196 891 FunFam Ent-copalyl diphosphate synthase, chloroplastic 336 560 - -
Spst1g03196 891 Pfam Terpene synthase family, metal binding domain 553 713 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03196 Spst-Chr1 40458288 40468509 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03196 K04120 - gmx:100784193 1394.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03196 1 40458288 40468509 Spst1g03196 1 40458288 40468509 ECH