Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03192 ATGGATTCCGTCGTACTCCACAGTGTGAGTGCGTCATCAGCGGCGTCATCGTCGTCGTCGTCGTCGTCAATGGCGAAGCGTCCATGTCCGTCGCAAAACCCTAGAGTGGACAACCTGAGCGATGTGGAGCGTCTTCTGGATGCGTTTCTCTCCCTCTCCGACCTCCCTTCTCTCTCCCTCGATCTCTCTTTCGAGAGGCTTCTCCAATCGGTCCCCTCCGACTCCGATCTCATCGATCGCGCCCTCAAAATGGGTTCTCTCCTCCTCGATGCCGCCAAACACTCTTCCCGGAAACGCGCTTCCAACCACAATTCACTCGCCTGGCCCCTTCCTCCCGACCTCACCATCAAGGTGTTTTCAATGCTTGATACCCAGAGCCTGTGCCATGCATCAGCTACATGTTCACTGTTTAGCAAATGTGCTAAAGATCCTTTGTGCTATGCAAATCTTGATTTGACCACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGAGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGTGTTGTCCCTGGTGCTACTACTTCACTTGGGTCTTGTCCACCATTTGTTTGTACCATCAGAAATGCTATTGTAGACGTATCTAACTTTTCATGGAATGATAAGAGATCTCGACAAGGGAGGGAGTCATCCATTCTCACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATTGCGGTGCTCCAGGGGCTCTTTTGAGAAAGTTGCACCTGTACAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCAGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTCGAGCTGAGGCAGACACTAATGTCAGTAAGTGCAAACTGCCACTTGATAGAGCGTTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGTAAACAATTGTCCTCATCTAACATCTTTATCTCTTAGAGGGTTTAAGCTACATGATTGCAAAGTTCGTGTACTGGTTAAGGGATTTAGGAAACTGAAATATGTTGACTTTTCAACATCCTATTCAATCACTGGTAACTTCTTGAGAAACCTTGGAAGCTGCAATGGGGGGAATCTACTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCAAGGCTGTTGACTGCAATTCTTGCTGGAGATTTCAAATTTCTTGTACATCTTGACATATCCAATAGGGAAGGTTTAGCATCTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAGCGAGGCCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTATATGGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTGCCCTCACAATTGAGCAGCCACACGTCAGATGGGTCAATTTTTATGAGTACATCTGAAAGTAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGATGGTCAAGATGCCAACTACGTGATATACGAAGAAAGCTCAGATGAGACTGACTTTTTGTCCCTCTAG 1596 0.4561 MDSVVLHSVSASSAASSSSSSSSMAKRPCPSQNPRVDNLSDVERLLDAFLSLSDLPSLSLDLSFERLLQSVPSDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCHASATCSLFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVDVSNFSWNDKRSRQGRESSILTRCCLSPLSGDCGAPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLEARPDMCLVAEYPSAEGSYMETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDETDFLSL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03192 531 MobiDBLite consensus disorder prediction 1 36 - -
Spst1g03192 531 FunFam F-box protein isoform A 103 404 - -
Spst1g03192 531 MobiDBLite consensus disorder prediction 493 511 - -
Spst1g03192 531 SUPERFAMILY F-box domain 97 155 IPR036047 GO:0005515
Spst1g03192 531 Pfam F-box-like 110 152 IPR001810 GO:0005515
Spst1g03192 531 SUPERFAMILY RNI-like 240 424 - -
Spst1g03192 531 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 110 398 - -
Spst1g03192 531 MobiDBLite consensus disorder prediction 493 513 - -
Spst1g03192 531 Gene3D Ribonuclease Inhibitor 103 422 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03192 K10268 - gmx:100786317 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03192 1 40378347 40385223 Spst1g03192 1 40378347 40385223 ECH