Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03190 ATGAAGGAGTTTCCTTCTTGCTTTGGAGAAAATGGTGTTCAGATTGTAGATTCCTCCTATTCAAGTACCACAAGGGGAGCTCAAAATGCTGTTACTTGTGTCTATCAGTGTAAGTTAGGAGGCCGTTCATGCTTGATTACAGTCTCTTGGACCAAAAATTTGATGGGACAAGGCTTGAGTGTGGGAATAGATGAGTTGGGTAATCATTGCCTCTGCAAGGTTGATATAAAGCCATGGTTGTTCTCGAAAAGAAAAGGGTCAAAGAATTTGGAGGTTGAGTCTAGTAAAATTGATATACTTTGGGACTTGAGCTGTGCTAAATTTGGTTCTGGACCGGAACCATTGGAGGGATTTTACTTGGTTGTTATGTTCAACCAAGATTTGGTCTTACTCCTTGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGATAGTGACTATGCTTGTGCTCACTCTGAAGCAGTTTTTATTGCAAAGAGAGAGCACATTTTTGGCAAGAAGTTGTATGGTGCAAGGGCTCAGTTTTGTGACAAGGGCCAAGTGCATGATGTGAGAATTGAGTGTGACACACTAGGGCTTAATGATCCATGCCTTGTGATCCGAATTGATAGCAAGACAGTGATGCAGGTGAAGCAACTCAAGTGGAAGTTCCGGGGCAATCACACCATTTTGGTGGATGGCCTACCAGTGGAAATATTTTGGGATGTACATAATTGGCTCTTTGGAAATGCTATGGGAAATGCTGTTTTTATGTTCCAAACTTGCATTTCAACTGAGAAGATGTGGGCAAGCCAATCTGTTTCTGATCCTTCTGTTCTCACATGGGCTTACTCTCAGCAGTTCAGGGATTCTCAATTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAAAAATGAGTAG 906 0.4205 MKEFPSCFGENGVQIVDSSYSSTTRGAQNAVTCVYQCKLGGRSCLITVSWTKNLMGQGLSVGIDELGNHCLCKVDIKPWLFSKRKGSKNLEVESSKIDILWDLSCAKFGSGPEPLEGFYLVVMFNQDLVLLLGDLKKEACKKIDSDYACAHSEAVFIAKREHIFGKKLYGARAQFCDKGQVHDVRIECDTLGLNDPCLVIRIDSKTVMQVKQLKWKFRGNHTILVDGLPVEIFWDVHNWLFGNAMGNAVFMFQTCISTEKMWASQSVSDPSVLTWAYSQQFRDSQLQGLGFSLILYAWKNE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03190 301 PANTHER EXPRESSED PROTEIN 4 299 IPR008586 -
Spst1g03190 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03190 Spst-Chr1 40370229 40371134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03190 1 301 EF-hand Containing Proteins AT5G28150 59.406 1.57e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03190 - - gmx:100786850 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03190 1 40370229 40371134 Spst1g03190 1 40370229 40371134 ECH
Spst1g03190 1 40370229 40371134 Spst7g01238 7 40356202 40357107 PCT