Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03186 ATGTTACAAATGGAGACACTCGTTGCTGTGGCGCATCACAGGAACCAATGTTACAGTCGGTCGAAATCCCAAGACCACGCCGAGTTTGGTTCCCCTTCACCTTCAAGAGATTTTAGGGGCATAAATTGCAGAACTTTCCAAACGGGGTGTGGTATTCTACCAACCCCACTCAATTCTCACACTTCACCGATAACTAAACGACCCAAAACGCCGATAACTCCTTCAAGCACAAACAATGCCCGTTGCAGAACTACTTCCAGTAGCGCCCCGGTTCCCGTCAATCAGAGAAAGGAGAGAAGTTTCAGCGAGCATGTTTCTGATGGGGGCATTTTGCTCACTGAACTTTGGGCTGGACCTACATATTCGAATTCTCCACCACCCAGTTCCTTGCCTATTCCGAAATTTTCTGTAAGGCCTAAGAGGAGTGTGTCCCTTGATCTCCCTGGTTCTTGTCCTGAATTTGAATTGCAGTTATATGCTAGTTCTGCCCCTTCCTCCCCTCGTGGGGAATTTTCTCCTTGTGCCAGAGACCTCTTTGATTCTGCGACGAAGGCGTTGCGTCGCATCCTCAATCTTAACTTGGATGATGAATGA 594 0.4798 MLQMETLVAVAHHRNQCYSRSKSQDHAEFGSPSPSRDFRGINCRTFQTGCGILPTPLNSHTSPITKRPKTPITPSSTNNARCRTTSSSAPVPVNQRKERSFSEHVSDGGILLTELWAGPTYSNSPPPSSLPIPKFSVRPKRSVSLDLPGSCPEFELQLYASSAPSSPRGEFSPCARDLFDSATKALRRILNLNLDDE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03186 197 MobiDBLite consensus disorder prediction 57 104 - -
Spst1g03186 197 MobiDBLite consensus disorder prediction 57 95 - -
Spst1g03186 197 PANTHER BNAA03G57290D PROTEIN 4 197 - -
Spst1g03186 197 Pfam Proline-rich nuclear receptor coactivator motif 116 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03186 Spst-Chr1 40328811 40329404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03186 - - gmx:102659741 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03186 1 40328811 40329404 Spst1g03186 1 40328811 40329404 ECH
Spst1g03186 1 40328811 40329404 Spst7g01251 7 40791899 40792492 PCT