Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03179 ATGAGAGATGAGAACTCGAAGAAGAGCAAGCTTTCTTGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCTGAGGATTTTCAGGCAGATGATGTTCTCTCCCATGGTCTTGATGAAGAGTGTAGTAGCAACTACTCAGAGAGGGAGGCATGCACCATGAGGAAAAGCAAATCAGAGAGATCAAGCAGATGGTACTCAGACAGAGTGAGAAGAGGTAAGAATGACCTTGATGAAGCTCAGGTTACTGATGTGTATAACTATAGAATCTTTGTTGCCACTTGGAATGTAGCAGGGAAGTCACCTCCAAGTTATTTGAGTCTTGAAGATTGGCTTCACACCTCTCCACCTGCTGATATATATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATTAGGAGGACCTTGAACAATCTTCCTGGAACAAGTGGAGGATGCCACACTCCTTCACCCCTCCCTGATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCTGCCTCTTTCTTTCAACGAAGATCATTCCAATCCTTGAGTCGTAGTTTGAGAATGGAAAATGATATGTTAATGCAACAAGCTTGCCTTGATCGTCGATTCAGTGTCTGTGATAGGGTGATATTTGGTCACAGAGCGAGTGACTATGATCCCAATTATCGATGGGGTTCCTCAGATGAAGAAAATGGCACTGGTGACTCCCCAATTACAACACAATATTCACCTATGTCATATGGCGGTTGTTTCTCTACAGAGGATAGTGATAGACAGACAGGCCACTCAAGATACTGCTTGGTTGCCAGTAAGCAAATGGTTGGGGTATTTCTAACTGTTTGGGTGAAAAGTGATATAAGAGATGATGTTCACAACATGAAAGTGTCTTGTGTTGGCCGAGGGTTAATGGGATATCTTGGAAACAAGGGATCAATATCAATTAGTATGTCATTGCACCAAACAAGCTTTTGCTTCATTTGTAGTCATTTGACTTCTGGACAAAAGGATGGTGATGAGTTAAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCCAGTCCATGACATGGGTGATGAAACTTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAGAGAATGACCAGCTGTGTATAGAACAAAGGCAAGGTCGAGTATTTGAAGGATGGAATGAAGGGAAAATATATTTCCCTCCAACATATAAGTATTCAAACAATTCAGACAGATATGCAGGTGATGACAGGCGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGGGGCCTTCACCAATTATCATATGTTCGTGGGGAGTCAAGATTTTCTGATCATAGGCCAGTTTATAGCATATTCTTGGCAGAGGTTGAGTCTATTAGCTGCAACCAAATAAAGAAAAGCTCCAGTTCCAGGATTGAAGTAGAAGAGTTGTTCCCACATTCACATGGTTACGGCTACTCTGATTTGAATTACTTTTGA 1674 0.4182 MRDENSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLSHGLDEECSSNYSEREACTMRKSKSERSSRWYSDRVRRGKNDLDEAQVTDVYNYRIFVATWNVAGKSPPSYLSLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRRTLNNLPGTSGGCHTPSPLPDPIVELDADFEGSMRQKAASFFQRRSFQSLSRSLRMENDMLMQQACLDRRFSVCDRVIFGHRASDYDPNYRWGSSDEENGTGDSPITTQYSPMSYGGCFSTEDSDRQTGHSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPPVHDMGDETSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMHDWKTLLENDQLCIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDDRRSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESISCNQIKKSSSSRIEVEELFPHSHGYGYSDLNYF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03179 557 SUPERFAMILY DNase I-like 81 531 IPR036691 -
Spst1g03179 557 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 542 - -
Spst1g03179 557 Pfam Endonuclease/Exonuclease/phosphatase family 96 510 IPR005135 GO:0003824
Spst1g03179 557 SMART i5p_5 225 525 IPR000300 GO:0016791|GO:0046856
Spst1g03179 557 Gene3D Endonuclease/exonuclease/phosphatase 271 543 IPR036691 -
Spst1g03179 557 Gene3D Endonuclease/exonuclease/phosphatase 70 185 IPR036691 -
Spst1g03179 557 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 533 IPR045849 GO:0004445
Spst1g03179 557 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03179 Spst-Chr1 40263989 40266935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03179 124 490 Acyl Lipid Metabolism Gene Families AT2G43900 26.329 9.34e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03179 - - gmx:100803074 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03179 1 40263989 40266935 Spst1g03179 1 40263989 40266935 ECH
Spst1g03179 1 40263989 40266935 Spst7g01259 7 41597583 41600548 PCT