Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03159 ATGGGTTGGTTTTCAAAGATTTACACTATTGTTATCTCTTTCGTTGGTTTCATAATTTGTCGAGGCTTTGCTCTCTCGATCAGTTTATATGACGTGGAATGCGTATCTGAACATGTTCTACATGATGGTGACACTGTTTCTGGGAATTTTGTAGTCATTGACTATGATATTTTTTGGAGCTCAGACCATCCAGGAATTGATTTCAGTGTGACATCTCCTGGAGGGAATTTGGTGTACTCTCTGAAGGGAACATCAGGGGACAAATTTCAATTCAAAGCCTCACTACATGGAATATATAAGTTTTGCTTTCAAAACCCTGCTTCAACGCCAGAGATTGTGTCTTTCTACATTCACGTTGGTCACATCCCAAACGAAAATGATTTGGCCAAAGATGAACATTTGGATCCCATTAATGTTAAGATTGCTGAGTTGAGAGAGGCACTTGAGTCAATTATAATAGAACAGAAGTACTTGAAAGCACGTGATACTAGACATCGACACACAAATGAAAGCACCAGAAAACGTGTGGTCTTCTACACAATCTTGGAGTATGTTTTGTTCGCTGCAACAAGCATATTACAAGTGGTATATATTCGACGTCTCTTCAGCAAGTCATTTGCTTACAACCGAGTGTAG 636 0.3915 MGWFSKIYTIVISFVGFIICRGFALSISLYDVECVSEHVLHDGDTVSGNFVVIDYDIFWSSDHPGIDFSVTSPGGNLVYSLKGTSGDKFQFKASLHGIYKFCFQNPASTPEIVSFYIHVGHIPNENDLAKDEHLDPINVKIAELREALESIIIEQKYLKARDTRHRHTNESTRKRVVFYTILEYVLFAATSILQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03159 211 Pfam emp24/gp25L/p24 family/GOLD 31 202 IPR009038 -
Spst1g03159 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 26 204 IPR015720 -
Spst1g03159 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 40 128 IPR036598 -
Spst1g03159 211 SMART EMP24_GP25L_2 24 203 IPR009038 -
Spst1g03159 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03159 Spst-Chr1 40099961 40101107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03159 K20347 - gmx:100789501 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03159 1 40099961 40101107 Spst1g03159 1 40099961 40101107 ECH