Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03146 ATGGCTCTTGCTCTGAAGTCAAGTTGCTTCTTGCAATTGAAGAAACCTGAGGTCGGTTTCCATGTTTGTTTTTCCTCCAAGAAAGCTTTAATCTCTGTCAAGAGATACACTACAGTGGCTGCTATGAGGACCATGAGAGCTCCGGGACTCTCTGAAACATTCACCAGACTGAAACAAGAAGGAAAAGTGGCTTTTATACCATATATCACAGCTGGTGATCCTGACCTTTCAACCACAGCAGAAGCACTAAAAGTTCTTGATTCATGCGGATCTGACATAATTGAGCTAGGTGTTCCGTATTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACAAGATCTCTTGCAAAGGGAACCAATTTAAATGCAATCATATCGATGTTGAAGGAGGTTGTTCCACAATTGTCATGTCCAATTGCACTGTTTACTTATTACAATCCTATACTGAAGCGTGGTACTGAGAGATTTATGTCCATCATAAGAGAAACTGGCGTACATGGGCTTGTAGTCCCGGATGTCCCTCTGGAGGAGACAGAGACTTTAAGAGAAGAAGCTAAGAAAAAAGGAATTGAACTGGTACTCCTCACAACACCTACCACTCCAAGAGATCGAATGAAAGCCATTGTTGATGCAGCAGAAGGATTTGTGTATCTTGTGAGCTCGGTGGGGGTCACAGGAGCCCGAGCATCAGTTAGTGGTAATGTTCAGTCTCTTCTGCAGCAAATTAAAGAGGCAACAACTAAACCTGTGGCTGTTGGTTTTGGAATATCAAAGCCCGAGCATGTTAAACAGGTAGCAGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCTATGGTGAAGGTGCTTGGTGAAGCCAAATCTCCTCAAGAGGGATTGAAAGAACTGGAAGTTTTCACCCGCTCCTTAAAGGAGGCACTTCCTTAA 936 0.4434 MALALKSSCFLQLKKPEVGFHVCFSSKKALISVKRYTTVAAMRTMRAPGLSETFTRLKQEGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNLNAIISMLKEVVPQLSCPIALFTYYNPILKRGTERFMSIIRETGVHGLVVPDVPLEETETLREEAKKKGIELVLLTTPTTPRDRMKAIVDAAEGFVYLVSSVGVTGARASVSGNVQSLLQQIKEATTKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKVLGEAKSPQEGLKELEVFTRSLKEALP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03146 311 Hamap Tryptophan synthase alpha chain [trpA]. 60 309 IPR002028 GO:0004834|GO:0006568
Spst1g03146 311 Gene3D Aldolase class I 49 311 IPR013785 -
Spst1g03146 311 Pfam Tryptophan synthase alpha chain 54 309 IPR002028 GO:0004834|GO:0006568
Spst1g03146 311 SUPERFAMILY Ribulose-phoshate binding barrel 50 290 IPR011060 -
Spst1g03146 311 CDD Tryptophan_synthase_alpha 64 307 IPR002028 GO:0004834|GO:0006568
Spst1g03146 311 ProSitePatterns Tryptophan synthase alpha chain signature. 94 107 IPR018204 GO:0004834
Spst1g03146 311 NCBIfam tryptophan synthase subunit alpha 54 307 IPR002028 GO:0004834|GO:0006568
Spst1g03146 311 FunFam Tryptophan synthase alpha chain, chloroplastic 48 311 - -
Spst1g03146 311 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 42 310 IPR002028 GO:0004834|GO:0006568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03146 K01695 - gmx:732610 549.28