Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03139 ATGGGGCACCCACAACTCGCGGCCTCCTCCGCCTCTTCCGACTCAAAGTTCGGTAAGAAACGCGGCAGTTACAACTGCGGCCGCTGTGGCCTCCCAAAGAAGGGCCATATCTGCACCATCAAGACCTCCACCACCCCTTCACACTCCTCTCACTCCGCCGCATCCGCTCCTTCCTCCGTCTCCGTCGATCGACTCCCTCCGCTCCACCCCCGCCGTGCTCTCTCCTTCGACGAAGAAACAGACAGACTCGATCCGTCGGAGTCCGCGGCCGCGTGGTTCCAGGGAAACGACCTGAATTCGACTGGGTTGCCCGGGAATGTTCTTTGGGATGTGCTAACGAGGCTCCCGCCTTCGGGACTCCTAACGGCGGCGAAGGTGTCCAGAGGCTGGAGGGATATGACGAGGAGTTTGTGGAAGGCGGCGGAGGAGTTAAGACTTAGGGTCCCGGTGACTGTTCAGGTGGGTTTCGTGGCATCGATGTTGCATAAGTGTCCGGGAATTGTGAAACTCTCTCTTGTAATGGAAAGTGACATGGATTCGACAATGCTGGCTTGCATTGCATTTTCGTGCCCCAACTTAGCATTCTTGGAGATATCGGTTTCTGATTCTGCAGTCAATCGAATCACCGGGAGTGAGTTAGGTCGATTTGTTGCTGATAAAAAGAGCCTCAAAAGCCTTAAGATGGAAGGTTGTTCTAACCTTGGAGGGTTTGTTCTTTGTTCTTCTAGTCTTTCTACCCTTTGGCTGTCGCATCTGTACTCTCTTTCTAAGATGGTTTTTAATTGTCCTCAGTTGCGAGAGATTTCATTGAAGTTTGCTCAGCAAGAAAATGACAGTACTGATCTTGCAACTATGGTTGAAGGTTTGGGAAGAAGTTGCCAGAGGCTGCAAAACATACATATATATTCAATGCAACTTTCTCATACTACTGTGCTCGCTCTTACTGCTGCTCAGTTAAGGGGCCTGCGAATGCTTTCACTTGTTCTTGGATCTGAAGTTACTGATGCATCTGTTGCTGCAATTGCATCAAGCTATCCAAATCTGGAATTGCTTGATCTCAGTGGATCCAGCGTCAGTGACAGTGGCATTAGCATGATTTGCAATGTGTTCTCTGAAACATTGTCAAGACTCCTTCTCGCTCTTTGCCCTAATGTGACTTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCACATCTTGAAATTATGGACTGTGGCATGACAATATGTGAACCCGATTCTCACAATCCAATTACTGATGAAAATAACTGCAAACTGCAGAAGACATCTATTACTAATCTACACCTTACAAACCAAAAGCTAATCATCAAACATAGTTGTTTAAAGAAACTTAGTTTATGGGGATGCTCAGGCTTGGATGCCTTATATTTAAACTGTGCTCAACTCAATGATCTGAATCTAAATTCTTGTAGAAATTTGCATCCAGAGAGACTGTTGCTTCAATGCCCAAGCTTAGAAAATGTGCATGCATCTGGTTGCCAGGACATGTTGATTGGATCTATCCAAAGTCAGGTTTGCGACGCTTTTACTGATTTGGAAAACCTTTCACATTGTAAACGTTTACCTGATGGCTCCAAAAGGGTTCGGGTCCCTCATCTAGTGAATACAGAGTCGGCCGATGATGAAACGAAGCGAAGTAGGAAAAAGAGACGACTTTGTAACGTCCTCCTGGATTGA 1698 0.4688 MGHPQLAASSASSDSKFGKKRGSYNCGRCGLPKKGHICTIKTSTTPSHSSHSAASAPSSVSVDRLPPLHPRRALSFDEETDRLDPSESAAAWFQGNDLNSTGLPGNVLWDVLTRLPPSGLLTAAKVSRGWRDMTRSLWKAAEELRLRVPVTVQVGFVASMLHKCPGIVKLSLVMESDMDSTMLACIAFSCPNLAFLEISVSDSAVNRITGSELGRFVADKKSLKSLKMEGCSNLGGFVLCSSSLSTLWLSHLYSLSKMVFNCPQLREISLKFAQQENDSTDLATMVEGLGRSCQRLQNIHIYSMQLSHTTVLALTAAQLRGLRMLSLVLGSEVTDASVAAIASSYPNLELLDLSGSSVSDSGISMICNVFSETLSRLLLALCPNVTSSGIQFATAQLPHLEIMDCGMTICEPDSHNPITDENNCKLQKTSITNLHLTNQKLIIKHSCLKKLSLWGCSGLDALYLNCAQLNDLNLNSCRNLHPERLLLQCPSLENVHASGCQDMLIGSIQSQVCDAFTDLENLSHCKRLPDGSKRVRVPHLVNTESADDETKRSRKKRRLCNVLLD 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03139 565 FunFam Uncharacterized protein 96 279 - -
Spst1g03139 565 MobiDBLite consensus disorder prediction 1 22 - -
Spst1g03139 565 SUPERFAMILY RNI-like 158 406 - -
Spst1g03139 565 MobiDBLite consensus disorder prediction 38 59 - -
Spst1g03139 565 Pfam F-box domain 103 136 IPR001810 GO:0005515
Spst1g03139 565 Gene3D Ribonuclease Inhibitor 140 413 IPR032675 -
Spst1g03139 565 MobiDBLite consensus disorder prediction 1 19 - -
Spst1g03139 565 ProSiteProfiles F-box domain profile. 97 141 IPR001810 GO:0005515
Spst1g03139 565 FunFam Uncharacterized protein 420 529 - -
Spst1g03139 565 MobiDBLite consensus disorder prediction 37 67 - -
Spst1g03139 565 Gene3D Ribonuclease Inhibitor 414 544 IPR032675 -
Spst1g03139 565 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 128 459 - -
Spst1g03139 565 SUPERFAMILY F-box domain 102 148 IPR036047 GO:0005515
Spst1g03139 565 Gene3D - 96 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03139 Spst-Chr1 39947110 39951594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03139 - - gmx:100792669 867.07