Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03138 ATGGCTTCATCCATCGCAACCATTCTCTTCAGTTTGCCCCAAAAGAACCAAACCCGCACCTTCTTATGCAATCCATCCAAAGCATCCTTATCACAAAACATTCTAACCACAACCAAACTCAAACACAGGGAAAGTTTCAAAAATTACACAACCAATATTACATGCAATGCTACGCTGTCATCTACTGTAGACGCCACTCAGAAACAAGAAGAACAAGAGAAGACACAAAAGCCCGTGGCGGAGGTCTGGCGCAAGATCCACGGGGAGGACAACTGGGCCGGGCTTCTTGAGCCCATGGACCCTGTAATGAGGGCCGAGCTTACCCGCTACGGTGAGATGGCCCAGGCCTGCTACGACGCCTTCGACTTCGACCCCTACTCCAAATACTGCGGCAGCTGCAGGTTCCCCTTACCTGAATTCTTCGAATCCCTGGACATGGCGCAGGTGGGATACACCATGACTCGTTACCTCTACGCGACGGCGAACATCAACCTCCCAAACTTCTTCCGCAAGTCGAGGTGGCCCCACCGGATGTGGAGCAAGCATGCGAACTGGGCTGGCTTCATCGCGGTGTCGGACGATGAGACAAGCAGGCGTCTGGGGCGGAGGGACATCACGATCTCGTGGCGAGGGACCGTGACGCACGTGGAGTGGGTGACCGACCTCATGAATTTCCTGAAACCGATCTCCCCGGACATACCCTGTTCCGACAAGGGCGTAAAGGTGGAAGCTGGTTTCTTAGATCTGTACACGGACAAGGAAACGGAGTGTGGGTATTGTAAGTACTCGGCGAGGGAACAGGTTCTCGGGGAGGTGAAGCGGTTGATGGAGGTTTATTCGGATGAAGAGGTGAGTATTACGATAACGGGACATAGTCTAGGGAGTGCAATGGCGATACTGAGTGCTTTTGATATTGTGGAAAGTGGGGTGAGCGTGGGAAAGGGTGGGAGAAAAGCGCATGTGTCTGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATGTAAGGTTCAAGAAGAGGTTGGAGGGGGAGTTGGGGATAAAGGTGCTGAGGGTGCATAATAAGCATGACATGGTCCCGCAGTCGCCGGGGTTCTTCTTCAACGAGGGGTCGCCGCCATGGGTGGTGAAGCTGGTGGAGTGGTTGCCCTGGTGTTATTTGCACGTTGGGGTGGAGTTGGAGTTGGATCATAAGAAATCGCCTTTCTTGAACCCTAATGGGGATGCTTCCTGCGCGCATAACTTGGAGGCTCACCTGCACTTGCTCGATGGATACCATGGAAAGAATGGAGGATTTGAGAGAACGAGTGAGAGGGACCTGGCTTTGGTGAACAAGGACTGTGACTTCTTGAAAGATGAGCATTCGGTGCCACCGCGGTGGAGGCAAGACCTGAACAAGGGCATGATCAAGACTGAAGATGGAGTGTGGGTGCTGCCTGAGCGTCCCTTATCTCAAGATCCCCATCAAGACATCGATCCCCATCTCCAGGAACTAGCTCTCCCTTCTTCCAACAAATCAATCAATCCATCAAAGACAAGTACGTGA 1542 0.5279 MASSIATILFSLPQKNQTRTFLCNPSKASLSQNILTTTKLKHRESFKNYTTNITCNATLSSTVDATQKQEEQEKTQKPVAEVWRKIHGEDNWAGLLEPMDPVMRAELTRYGEMAQACYDAFDFDPYSKYCGSCRFPLPEFFESLDMAQVGYTMTRYLYATANINLPNFFRKSRWPHRMWSKHANWAGFIAVSDDETSRRLGRRDITISWRGTVTHVEWVTDLMNFLKPISPDIPCSDKGVKVEAGFLDLYTDKETECGYCKYSAREQVLGEVKRLMEVYSDEEVSITITGHSLGSAMAILSAFDIVESGVSVGKGGRKAHVSVFSFSGPRVGNVRFKKRLEGELGIKVLRVHNKHDMVPQSPGFFFNEGSPPWVVKLVEWLPWCYLHVGVELELDHKKSPFLNPNGDASCAHNLEAHLHLLDGYHGKNGGFERTSERDLALVNKDCDFLKDEHSVPPRWRQDLNKGMIKTEDGVWVLPERPLSQDPHQDIDPHLQELALPSSNKSINPSKTST 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03138 513 MobiDBLite consensus disorder prediction 498 513 - -
Spst1g03138 513 Pfam Lipase (class 3) 207 364 IPR002921 GO:0006629
Spst1g03138 513 SUPERFAMILY alpha/beta-Hydrolases 167 422 IPR029058 -
Spst1g03138 513 CDD Lipase_3 139 396 - -
Spst1g03138 513 Gene3D alpha/beta hydrolase 82 490 IPR029058 -
Spst1g03138 513 FunFam Phospholipase A1-II 3 82 487 - -
Spst1g03138 513 MobiDBLite consensus disorder prediction 479 513 - -
Spst1g03138 513 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 14 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03138 Spst-Chr1 39925159 39927432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03138 62 499 Acyl Lipid Metabolism Gene Families AT2G30550 59.009 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03138 - - gmx:100815007 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03138 1 39925159 39927432 Spst7g01334 7 50240733 50244236 PCT