Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03136 ATGAAGTCATCGCGTTGGTGGCAGAGGACTCTGATCCTCGCTCTTCTCTCTATCTCTGTCGTTGCGCCGCTTGTCTTCGTGTATCACCGCGTCCATCTCACTCCCTACGCGCGACGAGAGTTTCTAGAAGATATATCCAGTGTTACATACAGGACAGATCCTTTACAGCTAAATGCTATTGAACAGGTAATGGAAGGTTTTATTAGAATTTTCGCCATCGAAGGTGCTGAAGAATTAGAAGAGCCAAAGGAAGTTGTTTATAAAGAAAAAGATTTTAGTTCAACAGATAGTTACATTCAACAAAAGATTAATGATTATGAGAAATCTAAAAGCGAAGGGTACAGAAATAACATTTTGGAAAGAAATGAATTCAACAAGGACAAAAGACAGGGTCAGAAAGCTCAGCAGAAAGGACCATTCTCCATGATTGGGAATAAGAATATATCTAATACAACAGTCACACATAATCTGAACATGCACACTCATTCTCAAAGAATGACAGATAATAATGTTGAAGTGACAGATACGCAATATATTCAAAGAGCAACCCAAAAGCGTCAGATTTCACATCGTCAGCCTCAGAAAGTGTCAAATCAGAAGGTTTGGGAAATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGGTTTGCTTCACCAGGCAGAAGCTCGCACCTGGTGAAGGAGTTGAAGCTGAGAATTAAAGAGATGGAACGTGCAGTTGGAGAAGCTACTAAGGATTCTGATCTGTCAAGGAGTGCTTTGCAGAAAATGCGACACATGGAGGCTTCACTGTCTAAAGCCCATCGTGCTTTCCCAGACTGTGCTGCTATGGCAGCTAAGCTCCGTGCAATGAATCATAATGCTGAAGAGAATATTCGTTCTCAGCAACGTGAAGCAACATATCTTGTTCATCTTGCTGCAAGGACTACCCCAAGAGGTCTTCACTGTCTTTCTATGCAGCTGACATCTGATTACTTTGCCCTGAGACCTGAGGACCGGAAGCTTCCAAATGAGAACAAGATTAATGATCCAAAACTTCATCATTATGTTGTCTTCTCTGACAATGTTCTGGCATGTGAAGTAGTTGTGAACTCCACAGTCTCTAATGCCAAGAAACAGGAAAAACTTGTTTTTCACGTAGTGACCAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAGGCCACACTCCACATACAAAGCATAGAGAACTTCAAATGGTTACCTAAGTACAATGCATTCAAAAATCATAATTCCAGTGATCCAAGATATACTTCAGAGTTGAACTACCTGCGTTTCTACCTCCCAGATATCTTCCCTACCTTAAATAAGGTTCTGCTCTTTGATCATGACGTGGTGGTGCAACAAGATCTCAGTAGACTATGGAATGTCAATATGAAAGGGAAAGTAATTGCAGCAGTTGGCACTTGTCAGGAGGGTGGAACTTCATTTCATCGGATGGATATGTTCATAAACTTCTCAGATCCATTCATAGCAAATAGGTTTGATGTCAATGCTTGCACGTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACAAAATTTAACTGCTCTCTATCACAGATATTTGCAAATGGGTTCCAAGAGGCCATTGTTGAACACCGGAAGTCTGCCTTTAGGCTGGCTGACCTTCTATAACAAGACTATGATTTTGGACAGACGGTGGCAGATTCTTGGCCTTGGTTATGACTCAGATGTTGATAAAAACCAGATTGAGCGGGCTGCGGTTATACACTTTGATGGAATAAGGAAACCGTGGTTAGACATTGCATTGGGAAGATATAAAAGTTACTGGACCAAATTTATTAACTTTGACAAACCTATTTTGCAACGATGCAATCTCCAGGCGTAG 1908 0.4119 MKSSRWWQRTLILALLSISVVAPLVFVYHRVHLTPYARREFLEDISSVTYRTDPLQLNAIEQVMEGFIRIFAIEGAEELEEPKEVVYKEKDFSSTDSYIQQKINDYEKSKSEGYRNNILERNEFNKDKRQGQKAQQKGPFSMIGNKNISNTTVTHNLNMHTHSQRMTDNNVEVTDTQYIQRATQKRQISHRQPQKVSNQKVWEIKDQIIRARAYLGFASPGRSSHLVKELKLRIKEMERAVGEATKDSDLSRSALQKMRHMEASLSKAHRAFPDCAAMAAKLRAMNHNAEENIRSQQREATYLVHLAARTTPRGLHCLSMQLTSDYFALRPEDRKLPNENKINDPKLHHYVVFSDNVLACEVVVNSTVSNAKKQEKLVFHVVTNSLNFPAIWMWFLLNPPGKATLHIQSIENFKWLPKYNAFKNHNSSDPRYTSELNYLRFYLPDIFPTLNKVLLFDHDVVVQQDLSRLWNVNMKGKVIAAVGTCQEGGTSFHRMDMFINFSDPFIANRFDVNACTWAFGMNLFDLQQWRRQNLTALYHRYLQMGSKRPLLNTGSLPLGWLTFYNKTMILDRRWQILGLGYDSDVDKNQIERAAVIHFDGIRKPWLDIALGRYKSYWTKFINFDKPILQRCNLQA 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03136 635 Pfam Glycosyl transferase family 8 317 609 IPR002495 GO:0016757
Spst1g03136 635 SUPERFAMILY Nucleotide-diphospho-sugar transferases 349 632 IPR029044 -
Spst1g03136 635 Coils Coil 279 299 - -
Spst1g03136 635 MobiDBLite consensus disorder prediction 122 145 - -
Spst1g03136 635 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 330 626 IPR029044 -
Spst1g03136 635 Coils Coil 227 247 - -
Spst1g03136 635 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 157 633 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03136 Spst-Chr1 39916198 39921661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03136 1 635 Glycosyltransferase AT1G06780 47.465 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03136 K13648 - gmx:100811619 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03136 1 39916198 39921661 Spst7g01344 7 51035510 51038758 PCT