Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03132 ATGTCCTCTCCGTCTTCTTCAGTGCCTCATTACAGTTCTCTCCCCTCACCCTCATCATCAGTCTCTGGTCCTTATTTTATTACTCGCCCTGTGACATCCACGCCTGCAGCCTTCGCCATACGCAGACCATGGGAAGAGGTATTCGCCCTCTACTCTTTCACGCGACCTTACTCCATCAACGAAGCAACTGTACGCGTGAAGCGCAACCTCAACCATTTCCGAGTGAACTACTTCATGATCGTGCTGTTTGTAATGTTCCTCAGCCTCCTCTGGCACCCGCTATCTATGATCGTGTTTTTGGTGGCGCTCATCGCATGGTTCTTTCTCTACTTCTTTAGGGACGAGCCTGTGGTGGTGTTTGGCACAGCCATGGACGATCGAGCGGTGGCGGCCGCACTTACTGCCGTGACAGTTGTGGCTCTGGTGTTCACCCGGGTGTGGGTGAACGTGGTAGTTTCCGTTGTAGTTGGGATTGCGCTGATGGTGTTGCATGCTGCCTTTAGGAGCAGCGAAGATTTGTACATGGATGAACACGAGGGTTACGATGGAGGGTTGCTTTCTTTCGTTGGGGCTTCCCCTACAAAACGAACTGGAGGGTACTATTCTTAG 609 0.5205 MSSPSSSVPHYSSLPSPSSSVSGPYFITRPVTSTPAAFAIRRPWEEVFALYSFTRPYSINEATVRVKRNLNHFRVNYFMIVLFVMFLSLLWHPLSMIVFLVALIAWFFLYFFRDEPVVVFGTAMDDRAVAAALTAVTVVALVFTRVWVNVVVSVVVGIALMVLHAAFRSSEDLYMDEHEGYDGGLLSFVGASPTKRTGGYYS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03132 202 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 26 179 IPR004895 -
Spst1g03132 202 Pfam PRA1 family protein 38 177 IPR004895 -
Spst1g03132 202 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03132 Spst-Chr1 39891127 39891735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03132 K20359 - gmx:100816074 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03132 1 39891127 39891735 Spst1g03132 1 39891127 39891735 ECH
Spst1g03132 1 39891127 39891735 Spst7g01346 7 51048398 51049867 PCT