Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03130 ATGGTTTTCACCCCTCACCCACCTCAAACTTCTTCAGATTATGACGTCAAACCCAGTTCAACACAGATCTTCGTAGCCTTATCTGTCGGGTTGGTGTTTGTCGTCGTCTTTCATTATCGTCTGAAACAAACTAGAGATCGAAAGATCATCCCACGTATAAGGAAATCGCGCGGAAGCCATATCCCAAAGCTTGAAAGATTCTCCCATTACGTAGCTAGGCAAATGGGGTTCAAAGACAGAAGACATTGTCCCCATCTATGTAGATTAGCTTCTGAATACATAAGGAAATACGAGGGATTTGAAGATGATATATACGCCTTCTTTGAGAATGAACCAGATGCCGATTCACTTTATGTGAAACTGGTAGAGGAGTTTGAGAGATGCATTCTTAGCTACTTAGGATTCCATTGGAACTACGGTGACACAATTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCAAAAAAGAGGCTCAAGCACATAGTTATGGCAGCAACTAGGGAACAAAGGTTCGAGAGACTTGCCAAAAATCTGAAGGTGGCTAGAGTTTTTAATACATTAGTGGAAGAAATGAAAGCGATGGGAATTGCTACAACTGATGACTCTCAATGTACAGAGGTGATGGCTCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTCCTCTTAATGGGTGGGGGCATGGGAGCTGGCAAGAGCACTGTGCTCAAGGATATTCTCAAAGAACCTTTTTGGGCAGGAGCAGCCGCGAATGCCGTAATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGCTCAAGAGGTCACCATGACATGATTCAAACAGCAGAACTGGTACACCAATCATCGACAGATGCAGCCTCATCACTCCTTGTTACAGCATTAAATGAAGGACGAGATGTTATTATGGATGGCACACTCTCCTGGGTGCCATTTGTTGTGCAGACAATAACAATGGCTAGGAATGTTCACCGTCGCCGTTACCGCATGGGACCTGGCTATAGGGTGAAGGAGGATGGAACTGTGATTGAAAACTACTGGGAAAGAATTCAAGGCGAAGAGCCTGAACAAGTTGAAGGCAAAAAAAGAAAACCATATAGGATTGAGCTGGTTGGTGTAGTATGTGATGCTTATCTTGCAGTCGTTAGAGGCATAAGGAGGGCCATCATGTGCAGAAGAGCAGTGAGAGTAAACTCACAGTTGAAATCACACAAGAGATTTGCTGAGGCATTTATGACTTATTGTCAACTAGTAGATAATGCACGACTATACTTCACAAACGCATTGGAAGGCCCACCCAAGTTGATAGGATGGAAAGATAGAGACAAGACACTGCTTGTTGATCCAGATGAATTCGACTGTTTGAAGAGGCTTGCCAAGTTAAACGAAAATGCCAACTCCATTTATGAACTTTACAAGCGCCCGAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTATTCAATCCAAAAAATTGAAAGCTTGAAATATAACTTCGCCATGGAAACTGATGAAATCATTCAACCTTTGGGTTTAAGTTGA 1605 0.433 MVFTPHPPQTSSDYDVKPSSTQIFVALSVGLVFVVVFHYRLKQTRDRKIIPRIRKSRGSHIPKLERFSHYVARQMGFKDRRHCPHLCRLASEYIRKYEGFEDDIYAFFENEPDADSLYVKLVEEFERCILSYLGFHWNYGDTIMSQVLSSENEPKKRLKHIVMAATREQRFERLAKNLKVARVFNTLVEEMKAMGIATTDDSQCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAANAVIIEADAFKESDVIYKALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGPGYRVKEDGTVIENYWERIQGEEPEQVEGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRVNSQLKSHKRFAEAFMTYCQLVDNARLYFTNALEGPPKLIGWKDRDKTLLVDPDEFDCLKRLAKLNENANSIYELYKRPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQKIESLKYNFAMETDEIIQPLGLS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03130 534 PANTHER UNCHARACTERIZED 12 519 IPR044802 -
Spst1g03130 534 Pfam Zeta toxin 212 323 IPR010488 GO:0005524|GO:0016301
Spst1g03130 534 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 341 IPR027417 -
Spst1g03130 534 Gene3D - 198 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03130 Spst-Chr1 39873200 39876953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03130 - - gmx:100794775 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03130 1 39873200 39876953 Spst1g03130 1 39873200 39876953 ECH