Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03119 ATGGTTATGGATTCGTCAAACGACGTCGCTTTGGTTTCTGAGGAGATGGAGAAGTTCCTCTGCGAGTTGTTGCTGGATTCCTCCCAGCCAATATCTGAGCGCTTCAGAGCACTCTTCTCTCTCCGCAACCTCAAAGGCCGCGCCCCTCGCGAGGCCCTTATTCTTGCCACAAGGGATTCATCGAATTTGTTGGCGCACGAAGCTGCATTTGCGTTGGGTCAAATGCAGGAATCGGAAGCAATCCCTGCTTTGGCTTCAGTTCTGAATGATCTCTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAGGCACTAGGTGCTATTGGTTTAGATGATAATGTTCCTCTCCTGAAGAATAGTTTGGATAAGGATCCCGCCGAGGAGGTTCGAGAAACGTGTGAGTTGGCTCTTCAACGAATTCAGCATTTGAAAGATGCTGGTAATATTGATGAATTGGCTGCAACTGAAATATCGCCTTTTAAGTCTGTTGATCCAGCCGCGCCAGCAACCTCTTGTACTTCTGTTCCACAACTGAGGCAAGTACTTCTTGATGAAGAAAAAGGGATGCATGAGCGCTATGCAGCACTTTTTGCACTTCGCAATGATGGTGGAAATGAAGCTGTTTCTGGTATTATTGATTCCTTGGGCTCGAAAAGTGCTCTACTGCGCCATGAGGTTGCATATGTTTTGGGTCAATTGCAAGACAAAGCTGCTTCTGCTGCTTTATCCAATATACTTAAAGATGTAAATGAGCACCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGATCAAAGTGTAGCCCTTCTTGAGGAGTTTACGGCAGATCCAGAACCTCTTGTCTCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAAAGATCAGGGAAATCATTCGAGTTCCTGTTCATGCGCACTCCAACTGTGCATTAA 954 0.4612 MVMDSSNDVALVSEEMEKFLCELLLDSSQPISERFRALFSLRNLKGRAPREALILATRDSSNLLAHEAAFALGQMQESEAIPALASVLNDLSLHPIVRHEAAEALGAIGLDDNVPLLKNSLDKDPAEEVRETCELALQRIQHLKDAGNIDELAATEISPFKSVDPAAPATSCTSVPQLRQVLLDEEKGMHERYAALFALRNDGGNEAVSGIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILKDVNEHPMVRHEAAEALGSIADDQSVALLEEFTADPEPLVSQSCQVALSMLEFERSGKSFEFLFMRTPTVH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03119 317 Gene3D - 155 306 IPR011989 -
Spst1g03119 317 Gene3D - 9 154 IPR011989 -
Spst1g03119 317 FunFam Deoxyhypusine hydroxylase 8 158 - -
Spst1g03119 317 FunFam Deoxyhypusine hydroxylase 166 307 - -
Spst1g03119 317 Pfam HEAT repeats 53 137 - -
Spst1g03119 317 SUPERFAMILY ARM repeat 11 140 IPR016024 -
Spst1g03119 317 PANTHER PBS LYASE HEAT-LIKE PROTEIN 15 302 - -
Spst1g03119 317 Coils Coil 126 146 - -
Spst1g03119 317 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 307 IPR027517 GO:0008612|GO:0019135
Spst1g03119 317 Pfam PBS lyase HEAT-like repeat 255 278 IPR004155 -
Spst1g03119 317 Pfam PBS lyase HEAT-like repeat 222 248 IPR004155 -
Spst1g03119 317 SUPERFAMILY ARM repeat 95 296 IPR016024 -
Spst1g03119 317 SMART E-Z type HEAT repeats 189 218 IPR004155 -
Spst1g03119 317 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Spst1g03119 317 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Spst1g03119 317 SMART E-Z type HEAT repeats 95 124 IPR004155 -
Spst1g03119 317 SMART E-Z type HEAT repeats 220 249 IPR004155 -
Spst1g03119 317 SMART E-Z type HEAT repeats 253 282 IPR004155 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03119 K06072 - gmx:100815364 527.324