Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03113 ATGGCGTTCTCTTCGTTTCTCGGCAGAGTCCTCTTTGCCTCCGTTTTTATCCTCTCTGCATACCAAGAATTTAATGCTTATGGAGTTGACGGGGGACCCGCAGCTAAAGCACTTAGACCGAAGTTTGATGCATTTGCACATCAAGTACATTCTAATGTTGGGTTTCAACTTCCAGATATTGATATGAAGATTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCATTGGAGGAATTCTTTTCATACTTGGCAGCTCATTTGGAGCTTTCCTTTTGCTTTTGCATCAAATGATTACCACTCCGATACTATATGATTTCTACAATTATGACAGCGAGGACAAAGAATTTATTCAACTTTTCATCAAATTTACTCAGAATATGGCCCTCTTCGGGGCTTTGTTGTTTTTCATTGGGATGAAAAACTCCATTCCTAGAAGGCAATCCAAGAAGAAGGCTCCTAAAACAAAAACCTACTAG 474 0.403 MAFSSFLGRVLFASVFILSAYQEFNAYGVDGGPAAKALRPKFDAFAHQVHSNVGFQLPDIDMKILVAGAIALKGIGGILFILGSSFGAFLLLLHQMITTPILYDFYNYDSEDKEFIQLFIKFTQNMALFGALLFFIGMKNSIPRRQSKKKAPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03113 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Spst1g03113 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03113 Spst-Chr1 39699281 39702168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03113 - - gmx:100500514 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03113 1 39699281 39702168 Spst1g03113 1 39699281 39702168 ECH
Spst1g03113 1 39699281 39702168 Spst7g00104 7 779083 780982 PCT