Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03107 ATGTTTAGCAGGCCAGGGCGTGCCAGTGCTTTTAGAATATTCAAATGGAAACAACCAGGTGCATCATCTCTGACAACAAGTTTACTTCAGGAAAATCAGCCAGAGATTGAATTGTCTGATTATGGAAAGTTTCCTAGTCCAGGCAGTGAGAGCCCTTCAGGGCTTCTTAATGGTGACAGCCTAAATGTGGAACCAATTTCTGATTTGGATCTCTTCTTTGAAAGGCTTTACAGCTATTACTGTGAGAAAGGGCTATGGTGCATCATTATAAAGTGGATTGTTGAACTTCTAAGTCTGGGGTTCACCATATGTTTTTCAGGTTTTTTTTTACTATATGTTGACTGGAATGGACTCCGAAATGCAAAGTGTGGGATGGATGCGGTTGAATCAGGAATTAAGCCCTGTGATCTTGTTAAAGAAGCTCTTCATCAACGTCCTTTAACCCCATTAACACTTAGCAAAGCTATCATTGTTGGATACTTGGGAATATTTTCTGTTTATTGGATTTTTTGCTTCTTGAGATTCTTTGCACAACTAAAGGATACTCTGAAAATCCGACATTTTTATTACAACAGTCTCCATGTTACAGACAATGAAATTCAAACCATGCCATGGGCTACAATTCTTGAAAAAGTTGTTCTGCTACAAAGGTCTCGACAGCTTTGTGTGGTAAAAGATCTTTCTGCCCATGACATTGTCATGCGGTTGATGCGGAAGGAAAACTATTTGATTGGAATGCTCAACAAAGGTGTATTAGCTTTTCCTATTTCACAGTTGTTTCCAGGCGCTGGTCCTACAGTGAAATCTATTTCTAATGAAATACAGAATCGTGTAATATTGACCAAGACCCTTGAATGGACTTTGAATTGGTGCATCCTTCAGAGTATGTTTGATCGAAACTTTTGTGTAAGAAGGGATTTTGTGTCAAATCCAAAGACATTACAAAGGAGGCTTATGGTAGTTGGGTTTGCAATGCTTTTACTCTCTCCGTTTCTTGTCATATTCATGCTAGTGTATCTCTTTCTGAGGCATGCTGAGCAGTTTTATAATCACCCTAGTACTGCATCATCTCGAAGATGGTCAAATCTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAAGCACCGGATTAATTGCAGTGTATTGCATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATAATTGCAAAATTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTCCTCGAGGAGTCTCTACTTGAGGGCCATATATTTGGGCGGAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCCGCCATTACAAATGAGCTTCTGGTCTTGGATGCTGAGGGAGCTATGTCTATGGTGGTTCATCATACTCATTATCTGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAACTGTCCGAGTTGAGTTTGCAACCTTATTCCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATACTTGCTTCTGTTTATTGTCCCGAAGCGGGTTGATGATATCTTGCTGTTCATTGCTGATTTCACTGTAAATGTTGAAGGTGTTGGCGATGTTTGCAGTTTTAGCACCTTTGATTTTCAAAAACATGGAAACAGTCATTATGGTTCCCCTTGCAATGCTCCTCGGAGCTGGAGGAGTTCCCAAGGAAAAATGGAGAAATCGTTGCTGAGCTTTCAGAGCAGTTATTCATCATGGGAACCAAGTGCACAGGGAAAACATTTTTTACTAAATATTAGAAAATTCAGAGAGGAAAAGTTACCAGTACATGGAAACATACCTGCAGCTTCTCCTCCTAGAATATTAAGGGGTATTTCCAACATGGGAAGCAATATTGGAGACAGAAACAGGTTTATGTCCAGGGAAATGCCATACAGTACATTCGGAACTGGAAATCACTTGGGTTCTTTGTGGTTGATTGAAACCAACCAAAACAATCATCCCTATCTCCTTGATTGGTACTATACATCTCGAATCCATGACGTGAACCCAGGAGACGATACTTTAGAACCGTTTGGAGTAATAGAGCATCCTCCTGAAGATCATTGGATGCCCTCCAATATGACACACAATGGAAGTGGGTATGAAGAATACTCAAATGAGAATAGACAAGGTTGGGCTGCATCTCATCTTGCCACGTCCATATCCGTTCCCATTTTCAGGGATAGCTCAATTAATGATCAAGGTTATAATGAACTGTCCCATAATACCAGGAGTCATTGGTGGGCTAGAAGTCACGCCCAACAGGATGTGCAGAATCAGACAAGCTTTTTTGAGCCTCCAGATTTCAATCAGGAAAGATATAATTATTATGATAAGTTTTCTGATAGAGGGTCTGAATATCAAGATTGTGAAATAGGCTTGTACTCTAGAGATGATCATAGATTATCTAGAACATATACAGATGACTTAAGGGACTTAGGGGCTGGGGAACTTAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACCCCACCTGCAAGCTTTTGA 2589 0.4032 MFSRPGRASAFRIFKWKQPGASSLTTSLLQENQPEIELSDYGKFPSPGSESPSGLLNGDSLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLVKEALHQRPLTPLTLSKAIIVGYLGIFSVYWIFCFLRFFAQLKDTLKIRHFYYNSLHVTDNEIQTMPWATILEKVVLLQRSRQLCVVKDLSAHDIVMRLMRKENYLIGMLNKGVLAFPISQLFPGAGPTVKSISNEIQNRVILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLQRRLMVVGFAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINCSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAITNELLVLDAEGAMSMVVHHTHYLPKRWRGKESTETVRVEFATLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILLFIADFTVNVEGVGDVCSFSTFDFQKHGNSHYGSPCNAPRSWRSSQGKMEKSLLSFQSSYSSWEPSAQGKHFLLNIRKFREEKLPVHGNIPAASPPRILRGISNMGSNIGDRNRFMSREMPYSTFGTGNHLGSLWLIETNQNNHPYLLDWYYTSRIHDVNPGDDTLEPFGVIEHPPEDHWMPSNMTHNGSGYEEYSNENRQGWAASHLATSISVPIFRDSSINDQGYNELSHNTRSHWWARSHAQQDVQNQTSFFEPPDFNQERYNYYDKFSDRGSEYQDCEIGLYSRDDHRLSRTYTDDLRDLGAGELNLHFDDIYSRPPETPPASF 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03107 862 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Spst1g03107 862 PANTHER APG9 AUTOPHAGY 9 2 806 IPR007241 GO:0006914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03107 K17907 - gmx:100777405 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03107 1 39664417 39669329 Spst1g03107 1 39664417 39669329 ECH