Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03096 ATGTCTTTCAGGGGCCTGAGCAGGCCAAATGCTTCATCAGGCATGGGTGTTGCTGATCACAGCAAAAACACCTTCATGGAACTGAAGCAGAAGAAAGTCCATCGCTATGTGATCTTTAAGGTTGATGAAAAGAAAAGGGAGGTTGTGGTTGAGAAAACCGGTGGACCTGCTGAGAGCTATGATGATTTCGCTGCATCTTTGCCTGACAATGATTGCAGATATGCTGTCTTTGACTTTGATTTCGTCACTTCTGAGAACTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCCCCTTCAACGTCTCGGATCCGTGCCAAGATGCTATACGCCACAACTAAAGACAGGTTTAGACGTGAGCTAGATGGTGTTCATTATGAAATCCAGGCTACTGACCCCACAGAAATGGATCTTGAAGTGCTGAGAGAACGTGCACATTGA 441 0.4512 MSFRGLSRPNASSGMGVADHSKNTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPDNDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKDRFRRELDGVHYEIQATDPTEMDLEVLRERAH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03096 146 ProSiteProfiles ADF-H domain profile. 14 146 IPR002108 GO:0003779
Spst1g03096 146 FunFam Actin-depolymerizing factor 2 8 146 - -
Spst1g03096 146 SUPERFAMILY Actin depolymerizing proteins 11 146 - -
Spst1g03096 146 Gene3D Severin 5 146 IPR029006 -
Spst1g03096 146 Pfam Cofilin/tropomyosin-type actin-binding protein 22 144 IPR002108 GO:0003779
Spst1g03096 146 PANTHER COFILIN-RELATED 10 145 IPR017904 GO:0015629|GO:0030042
Spst1g03096 146 SMART adf_2 19 146 IPR002108 GO:0003779
Spst1g03096 146 CDD ADF_cofilin_like 13 145 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03096 Spst-Chr1 39509174 39510923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03096 K05765 - gmx:100819975 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03096 1 39509174 39510923 Spst1g03096 1 39509174 39510923 ECH